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GENE CARD

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Gene Card

Best human hits

RNF123; RSPRY1; RYR2

Species

P.mammillata

Unique Gene ID

Phmamm.g00000528

Gene Model ID

Phmamm.CG.MTP2014.S12.g00528

Location

S12:304838..343253

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

8 results

AHC0AAA22YI02

Plate: Plate_22_I02

AHC0AAA108YN10

Plate: Plate_108_N10

AHC0AAA133YI23

Plate: Plate_133_I23

AHC0AAA154YG20

Plate: Plate_154_G20

AHC0AAA133YI21

Plate: Plate_133_I21

AHC0AAA201YD22

Plate: Plate_201_D22

AHC0AAA254YJ11

Plate: Plate_254_J11

AHC0AAA256YJ16

Plate: Plate_256_J16

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
B30.2/SPRY ProSiteProfiles B30.2/SPRY domain
ConA-like_dom_sf SUPERFAMILY Concanavalin A-like lectin/glucanase domain superfamily
SPRY_dom SMART SPRY domain
SPRY_dom Pfam SPRY domain
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type
Znf_RING ProSiteProfiles Zinc finger, RING-type

GOSlim

34 results

GO Term Annotation Origin Type
binding Blast molecular function
calcium ion binding Blast molecular function
protein binding Orthology molecular function
calmodulin binding Blast molecular function
extracellular region Blast cellular component
cell Blast cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
plasma membrane Blast cellular component
ion transport Blast biological process
membrane Blast cellular component
integral component of membrane Blast cellular component
protein ubiquitination Orthology biological process
transferase activity Orthology molecular function
enzyme binding Blast molecular function
protein kinase binding Blast molecular function
nuclear membrane Orthology cellular component
macromolecular complex Blast cellular component
identical protein binding Blast molecular function
metal ion binding Orthology molecular function
transmembrane transport Blast biological process
extracellular exosome Blast cellular component
organic cyclic compound binding Blast molecular function
peptidase activity, acting on L-amino acid peptides Orthology molecular function
metal ion transport Blast biological process
intracellular signal transduction Blast biological process
endoplasmic reticulum Blast cellular component
endoplasmic reticulum membrane Blast cellular component
bounding membrane of organelle Blast cellular component
cytoplasmic part Blast cellular component
organelle part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
small molecule binding Blast molecular function
anion binding Blast molecular function

GO (Orthology)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function
cytoplasm Hs cellular component
cytosol Hs cellular component
protein ubiquitination Hs biological process
protein deubiquitination Hs biological process
transferase activity Hs molecular function
nuclear membrane Hs cellular component
metal ion binding Hs molecular function

GO (Blast)

37 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
ion channel activity Hs molecular function 90.5 4.50e-18
ryanodine-sensitive calcium-release channel activity Hs molecular function 90.5 4.50e-18
calcium channel activity Hs molecular function 90.5 4.50e-18
binding Hs molecular function 95.9 2.90e-20
calcium ion binding Hs molecular function 90.5 4.50e-18
protein binding Hs molecular function 311 9.41e-89
calmodulin binding Hs molecular function 90.5 4.50e-18
extracellular region Hs cellular component 95.9 2.90e-20
cell Hs cellular component 90.5 4.50e-18
cytoplasm Hs cellular component 311 9.41e-89
smooth endoplasmic reticulum Hs cellular component 90.5 4.50e-18
cytosol Hs cellular component 311 9.41e-89
plasma membrane Hs cellular component 90.5 4.50e-18
junctional sarcoplasmic reticulum membrane Hs cellular component 90.5 4.50e-18
calcium-release channel activity Hs molecular function 90.5 4.50e-18
membrane Hs cellular component 90.5 4.50e-18
integral component of membrane Hs cellular component 90.5 4.50e-18
sarcoplasmic reticulum Hs cellular component 90.5 4.50e-18
transferase activity Hs molecular function 311 9.41e-89
enzyme binding Hs molecular function 90.5 4.50e-18
protein kinase binding Hs molecular function 90.5 4.50e-18
sarcomere Hs cellular component 90.5 4.50e-18
Z disc Hs cellular component 90.5 4.50e-18
nuclear membrane Hs cellular component 311 9.41e-89
macromolecular complex Hs cellular component 90.5 4.50e-18
sarcoplasmic reticulum membrane Hs cellular component 90.5 4.50e-18
protein kinase A catalytic subunit binding Hs molecular function 90.5 4.50e-18
protein kinase A regulatory subunit binding Hs molecular function 90.5 4.50e-18
calcium channel complex Hs cellular component 90.5 4.50e-18
identical protein binding Hs molecular function 90.5 4.50e-18
protein self-association Hs molecular function 90.5 4.50e-18
suramin binding Hs molecular function 90.5 4.50e-18
ion channel binding Hs molecular function 90.5 4.50e-18
metal ion binding Hs molecular function 311 9.41e-89
calcium-induced calcium release activity Hs molecular function 90.5 4.50e-18
extracellular exosome Hs cellular component 90.5 4.50e-18
organic cyclic compound binding Hs molecular function 90.5 4.50e-18

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding SMART molecular function 5.2E-27