Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

FAM50A; FAM50B

Species

P.mammillata

Unique Gene ID

Phmamm.g00003638

Gene Model ID

Phmamm.CG.MTP2014.S120.g03638

Location

S120:169399..172071

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S120.g03638.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
XAP5 Pfam XAP5 protein
XAP5 PANTHER XAP5 protein

GOSlim

6 results

GO Term Annotation Origin Type
RNA binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
spermatogenesis Orthology biological process
extracellular region part Orthology cellular component

GO (Orthology)

6 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
RNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
spermatogenesis Hs biological process
intercellular bridge Hs cellular component

GO (Blast)

5 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 251 5.50e-84
protein binding Hs molecular function 238 9.08e-79
nucleus Hs cellular component 251 5.50e-84
nucleoplasm Hs cellular component 251 5.50e-84
intercellular bridge Hs cellular component 238 9.08e-79

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleus PANTHER cellular component 4.2E-82