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GENE CARD

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Gene Card

Best human hits

FAM50A; FAM50B

Species

P.mammillata

Unique Gene ID

Phmamm.g00003639

Gene Model ID

Phmamm.CG.MTP2014.S120.g03639

Location

S120:169829..173183

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S120.g03639.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

3 results

AHC0AAA21YN13

Plate: Plate_21_N13

AHC0AAA25YA21

Plate: Plate_25_A21

AHC0AAA141YC12

Plate: Plate_141_C12

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
XAP5 Pfam XAP5 protein
XAP5 PANTHER XAP5 protein

GOSlim

6 results

GO Term Annotation Origin Type
RNA binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
spermatogenesis Orthology biological process
extracellular region part Orthology cellular component

GO (Orthology)

6 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
RNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
spermatogenesis Hs biological process
intercellular bridge Hs cellular component

GO (Blast)

5 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 229 1.49e-74
protein binding Hs molecular function 195 1.50e-61
nucleus Hs cellular component 229 1.49e-74
nucleoplasm Hs cellular component 229 1.49e-74
intercellular bridge Hs cellular component 195 1.50e-61

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleus PANTHER cellular component 8.4E-83