Aniseed - Gene card

Gene Card

Best human hits

ANKHD1-EIF4EBP3; ANKMY2; ANKRD17

Species

P.mammillata

Unique Gene ID

Phmamm.g00003668

Gene Model ID

Phmamm.CG.MTP2014.S122.g03668

Location

S122:112378..116608

Transcript Models and Sequences

Phmamm.CG.MTP2014.S122.g03668.01.t
Phmamm.CG.MTP2014.S122.g03668.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

6 results

AHC0AAA214YD10

Plate: Plate_214_D10

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
Ankyrin_rpt-contain_sf	Gene3D	Ankyrin repeat-containing domain superfamily
Ankyrin_rpt-contain_dom	CDD	Ankyrin repeat-containing domain
Ankyrin_rpt	ProSiteProfiles	Ankyrin repeat
Ankyrin_rpt	SMART	Ankyrin repeat
Znf_MYND	Pfam	Zinc finger, MYND-type
Ankyrin_rpt-contain_sf	SUPERFAMILY	Ankyrin repeat-containing domain superfamily
Ankyrin_rpt-contain_dom	ProSiteProfiles	Ankyrin repeat-containing domain
Znf_MYND	ProSiteProfiles	Zinc finger, MYND-type

GOSlim

18 results

GO Term	Annotation Origin	Type
nucleic acid binding	Blast	molecular function
chromatin binding	Blast	molecular function
RNA binding	Blast	molecular function
protein binding	Orthology	molecular function
nucleus	Blast	cellular component
cytoplasm	Blast	cellular component
membrane	Blast	cellular component
enzyme binding	Orthology	molecular function
nuclear membrane	Blast	cellular component
cell projection	Orthology	cellular component
metal ion binding	Orthology	molecular function
organelle	Orthology	cellular component
plasma membrane region	Orthology	cellular component
macromolecular complex	Orthology	cellular component
cell surface receptor signaling pathway	Orthology	biological process
regulation of signal transduction	Orthology	biological process
intracellular organelle part	Blast	cellular component
intracellular non-membrane-bounded organelle	Blast	cellular component

GO (Orthology)

6 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
protein binding	Hs	molecular function
cilium	Hs	cellular component
regulation of smoothened signaling pathway	Hs	biological process
enzyme binding	Hs	molecular function
cell projection	Hs	cellular component
metal ion binding	Hs	molecular function

GO (Blast)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
chromatin	Hs	cellular component	62.8	1.27e-10
nucleic acid binding	Hs	molecular function	62.8	1.27e-10
chromatin binding	Hs	molecular function	62.8	1.27e-10
RNA binding	Hs	molecular function	62.8	1.27e-10
protein binding	Hs	molecular function	288	1.10e-94
nucleus	Hs	cellular component	62.8	1.27e-10
cytoplasm	Hs	cellular component	62.8	1.27e-10
cilium	Hs	cellular component	288	1.10e-94
membrane	Hs	cellular component	62.8	1.27e-10
enzyme binding	Hs	molecular function	288	1.10e-94
nuclear membrane	Hs	cellular component	62.8	1.27e-10
cell projection	Hs	cellular component	288	1.10e-94
metal ion binding	Hs	molecular function	288	1.10e-94

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein binding	SMART	molecular function	3.8E-4