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GENE CARD

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Gene Card

Best human hits

NOD1

Species

P.mammillata

Unique Gene ID

Phmamm.g00014133

Gene Model ID

Phmamm.CG.MTP2014.S1220.g14133

Location

S1220:27050..28671

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S1220.g14133.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term Analysis Definition
Leu-rich_rpt Pfam Leucine-rich repeat

GOSlim

17 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
cytoplasm Blast cellular component
cytosol Blast cellular component
plasma membrane Blast cellular component
membrane Blast cellular component
basolateral plasma membrane Blast cellular component
apical plasma membrane Blast cellular component
identical protein binding Blast molecular function
protein homodimerization activity Blast molecular function
endopeptidase activity Blast molecular function
enzyme activator activity Blast molecular function
positive regulation of hydrolase activity Blast biological process
enzyme binding Blast molecular function
positive regulation of apoptotic process Blast biological process
carbohydrate derivative binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 43.9 8.75e-05
protein binding Hs molecular function 43.9 8.75e-05
ATP binding Hs molecular function 43.9 8.75e-05
cytoplasm Hs cellular component 43.9 8.75e-05
cytosol Hs cellular component 43.9 8.75e-05
plasma membrane Hs cellular component 43.9 8.75e-05
cysteine-type endopeptidase activator activity involved in apoptotic process Hs molecular function 43.9 8.75e-05
membrane Hs cellular component 43.9 8.75e-05
basolateral plasma membrane Hs cellular component 43.9 8.75e-05
apical plasma membrane Hs cellular component 43.9 8.75e-05
identical protein binding Hs molecular function 43.9 8.75e-05
protein homodimerization activity Hs molecular function 43.9 8.75e-05
peptidoglycan binding Hs molecular function 43.9 8.75e-05
CARD domain binding Hs molecular function 43.9 8.75e-05

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Pfam molecular function 0.012