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  4. Gene 'Phmamm.CG.MTP2014.S1...'

Gene Card

Best human hits

CAPZA1; CAPZA2; CAPZA3

Species

P.mammillata

Unique Gene ID

Phmamm.g00003678

Gene Model ID

Phmamm.CG.MTP2014.S123.g03678

Location

S123:24827..28970

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S123.g03678.01.t
Phmamm.CG.MTP2014.S123.g03678.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

10 results

AHC0AAA3YJ21

Plate: Plate_3_J21

AHC0AAA5YP06

Plate: Plate_5_P06

AHC0AAA49YI18

Plate: Plate_49_I18

AHC0AAA126YO12

Plate: Plate_126_O12

AHC0AAA141YH09

Plate: Plate_141_H09

AHC0AAA159YI05

Plate: Plate_159_I05

AHC0AAA170YM15

Plate: Plate_170_M15

AHC0AAA205YD01

Plate: Plate_205_D01

AHC0AAA235YH09

Plate: Plate_235_H09

AHC0AAA268YA10

Plate: Plate_268_A10

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
F-actin_cap_asu_CS ProSitePatterns F-actin capping protein, alpha subunit, conserved site
CapZ_alpha PRINTS F-actin-capping protein subunit alpha
CapZ_alpha/beta SUPERFAMILY F-actin-capping protein subunit alpha/beta
CapZ_alpha Pfam F-actin-capping protein subunit alpha
CapZ_alpha PANTHER F-actin-capping protein subunit alpha

GOSlim

23 results

GO Term Annotation Origin Type
actin binding Orthology molecular function
protein binding Orthology molecular function
extracellular region Orthology cellular component
nucleus Blast cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
cytoskeleton Orthology cellular component
brush border Orthology cellular component
blood coagulation Orthology biological process
membrane Orthology cellular component
integral component of membrane Orthology cellular component
innate immune response Orthology biological process
extracellular exosome Orthology cellular component
intracellular transport Orthology biological process
cytoskeletal part Orthology cellular component
macromolecular complex Orthology cellular component
immune system process Orthology biological process
cytoplasmic part Orthology cellular component
cell periphery Orthology cellular component
cell adhesion molecule binding Orthology molecular function
organelle organization Orthology biological process
cytoplasmic vesicle Blast cellular component
endomembrane system Blast cellular component

GO (Orthology)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
actin binding Hs molecular function
protein binding Hs molecular function
extracellular region Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
brush border Hs cellular component
ER to Golgi vesicle-mediated transport Hs biological process
blood coagulation Hs biological process
F-actin capping protein complex Hs cellular component
actin cytoskeleton Hs cellular component
membrane Hs cellular component
integral component of membrane Hs cellular component
antigen processing and presentation of exogenous peptide antigen via MHC class II Hs biological process
cortical cytoskeleton Hs cellular component
innate immune response Hs biological process
cadherin binding Hs molecular function
barbed-end actin filament capping Hs biological process
actin filament capping Hs biological process
extracellular exosome Hs cellular component
WASH complex Hs cellular component

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
acrosomal vesicle Hs cellular component 127 5.99e-35
actin binding Hs molecular function 296 5.93e-101
protein binding Hs molecular function 296 5.93e-101
extracellular region Hs cellular component 296 5.93e-101
nucleus Hs cellular component 127 5.99e-35
cytoplasm Hs cellular component 283 6.89e-96
cytosol Hs cellular component 296 5.93e-101
cytoskeleton Hs cellular component 283 6.89e-96
brush border Hs cellular component 296 5.93e-101
F-actin capping protein complex Hs cellular component 296 5.93e-101
actin cytoskeleton Hs cellular component 296 5.93e-101
membrane Hs cellular component 296 5.93e-101
integral component of membrane Hs cellular component 296 5.93e-101
cortical cytoskeleton Hs cellular component 296 5.93e-101
cadherin binding Hs molecular function 283 6.89e-96
extracellular exosome Hs cellular component 296 5.93e-101
WASH complex Hs cellular component 283 6.89e-96

GO (InterProScan)

2 results

GO Term Analysis Type e-value
F-actin capping protein complex PANTHER cellular component 6.8E-100
barbed-end actin filament capping PANTHER biological process 6.8E-100

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