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GENE CARD

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Gene Card

Best human hits

BIRC3; MIB1; MIB2

Species

P.mammillata

Unique Gene ID

Phmamm.g00003684

Gene Model ID

Phmamm.CG.MTP2014.S123.g03684

Location

S123:57362..74637

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

3 results

AHC0AAA18YH07

Plate: Plate_18_H07

AHC0AAA70YK07

Plate: Plate_70_K07

AHC0AAA218YN24

Plate: Plate_218_N24

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
Mib_Herc2_sf SUPERFAMILY Mib/herc2 domain superfamily
Znf_ZZ Pfam Zinc finger, ZZ-type
Mib_Herc2 ProSiteProfiles Mib-herc2
Znf_ZZ SMART Zinc finger, ZZ-type
Mib_Herc2 Pfam Mib-herc2
Znf_ZZ ProSiteProfiles Zinc finger, ZZ-type
Mib_Herc2_sf Gene3D Mib/herc2 domain superfamily
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type
Znf_RING ProSiteProfiles Zinc finger, RING-type
Znf_RING SMART Zinc finger, RING-type

GOSlim

35 results

GO Term Annotation Origin Type
protein polyubiquitination Orthology biological process
actin binding Orthology molecular function
ubiquitin-protein transferase activity Orthology molecular function
signal transducer activity Orthology molecular function
protein binding Orthology molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Orthology cellular component
endosome Orthology cellular component
early endosome Orthology cellular component
centrosome Blast cellular component
microtubule organizing center Blast cellular component
cytosol Orthology cellular component
cytoskeleton Blast cellular component
plasma membrane Blast cellular component
Notch signaling pathway Orthology biological process
zinc ion binding Orthology molecular function
membrane Blast cellular component
protein ubiquitination Orthology biological process
transferase activity Orthology molecular function
cytoplasmic vesicle Blast cellular component
negative regulation of apoptotic process Blast biological process
membrane raft Blast cellular component
metal ion binding Orthology molecular function
intracellular part Orthology cellular component
macromolecular complex Orthology cellular component
transcription factor activity, sequence-specific DNA binding Orthology molecular function
intracellular signal transduction Orthology biological process
positive regulation of signal transduction Orthology biological process
organelle Blast cellular component
postsynapse Blast cellular component
neuron part Blast cellular component
endopeptidase activity Blast molecular function
enzyme regulator activity Blast molecular function
enzyme binding Blast molecular function

GO (Orthology)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
ubiquitin ligase complex Hs cellular component
protein polyubiquitination Hs biological process
actin binding Hs molecular function
ubiquitin-protein transferase activity Hs molecular function
signal transducer activity Hs molecular function
protein binding Hs molecular function
cytoplasm Hs cellular component
endosome Hs cellular component
early endosome Hs cellular component
cytosol Hs cellular component
Notch signaling pathway Hs biological process
zinc ion binding Hs molecular function
protein ubiquitination Hs biological process
transferase activity Hs molecular function
positive regulation of I-kappaB kinase/NF-kappaB signaling Hs biological process
metal ion binding Hs molecular function
ubiquitin protein ligase activity Hs molecular function

GO (Blast)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
ubiquitin ligase complex Hs cellular component 235 7.91e-66
actin binding Hs molecular function 235 7.91e-66
ubiquitin-protein transferase activity Hs molecular function 236 1.59e-66
signal transducer activity Hs molecular function 235 7.91e-66
protein binding Hs molecular function 236 1.59e-66
nucleus Hs cellular component 62.4 5.04e-10
nucleoplasm Hs cellular component 62.4 5.04e-10
cytoplasm Hs cellular component 236 1.59e-66
endosome Hs cellular component 235 7.91e-66
early endosome Hs cellular component 235 7.91e-66
centrosome Hs cellular component 236 1.59e-66
microtubule organizing center Hs cellular component 236 1.59e-66
cytosol Hs cellular component 236 1.59e-66
cytoskeleton Hs cellular component 236 1.59e-66
plasma membrane Hs cellular component 236 1.59e-66
zinc ion binding Hs molecular function 236 1.59e-66
postsynaptic density Hs cellular component 236 1.59e-66
membrane Hs cellular component 236 1.59e-66
transferase activity Hs molecular function 236 1.59e-66
cytoplasmic vesicle Hs cellular component 236 1.59e-66
cysteine-type endopeptidase inhibitor activity involved in apoptotic process Hs molecular function 62.4 5.04e-10
membrane raft Hs cellular component 62.4 5.04e-10
metal ion binding Hs molecular function 236 1.59e-66
ubiquitin protein ligase activity Hs molecular function 235 7.91e-66

GO (InterProScan)

4 results

GO Term Analysis Type e-value
ubiquitin-protein transferase activity Gene3D molecular function 9.4E-21
zinc ion binding Pfam molecular function 1.5E-9
protein ubiquitination Pfam biological process 7.1E-19
metal ion binding Gene3D molecular function 9.4E-21