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GENE CARD

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Gene Card

Best human hits

ACSM2A; ACSM2B; ACSM3

Species

P.mammillata

Unique Gene ID

Phmamm.g00014193

Gene Model ID

Phmamm.CG.MTP2014.S1235.g14193

Location

S1235:33000..34533

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S1235.g14193.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

1 result

AHC0AAA170YC18

Plate: Plate_170_C18

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
AMP-dep_Synth/Lig Pfam AMP-dependent synthetase/ligase
AMP-binding_CS ProSitePatterns AMP-binding, conserved site
AMP-bd_C Pfam AMP-binding enzyme, C-terminal domain

GOSlim

11 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
catalytic activity Blast molecular function
ATP binding Blast molecular function
mitochondrion Blast cellular component
mitochondrial matrix Blast cellular component
metabolic process InterProScan biological process
membrane Blast cellular component
integral component of membrane Blast cellular component
ligase activity Blast molecular function
metal ion binding Blast molecular function
transferase activity Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 105 4.94e-24
catalytic activity Hs molecular function 105 4.94e-24
acyl-CoA ligase activity Hs molecular function 105 4.94e-24
fatty-acyl-CoA synthase activity Hs molecular function 105 4.94e-24
ATP binding Hs molecular function 105 4.94e-24
mitochondrion Hs cellular component 105 4.94e-24
mitochondrial matrix Hs cellular component 105 4.94e-24
fatty acid ligase activity Hs molecular function 105 4.94e-24
membrane Hs cellular component 97.8 1.51e-21
integral component of membrane Hs cellular component 97.8 1.51e-21
CoA-ligase activity Hs molecular function 97.8 1.51e-21
ligase activity Hs molecular function 105 4.94e-24
metal ion binding Hs molecular function 105 4.94e-24
butyrate-CoA ligase activity Hs molecular function 105 4.94e-24

GO (InterProScan)

2 results

GO Term Analysis Type e-value
catalytic activity Pfam molecular function 1.9E-76
metabolic process Pfam biological process 1.9E-76