Gene Card
Best human hits
DKC1; TRUB1
Species
Unique Gene ID
Phmamm.g00003784
Gene Model ID
Phmamm.CG.MTP2014.S127.g03784
Location
S127:112264..117769
Transcript Models and Sequences
Phmamm.CG.MTP2014.S127.g03784.01.t
Phmamm.CG.MTP2014.S127.g03784.02.t
AHC0AAA12YI20
Plate: Plate_12_I20
AHC0AAA14YG23
Plate: Plate_14_G23
AHC0AAA14YK10
Plate: Plate_14_K10
AHC0AAA18YH16
Plate: Plate_18_H16
AHC0AAA18YI04
Plate: Plate_18_I04
AHC0AAA22YD24
Plate: Plate_22_D24
AHC0AAA4YJ07
Plate: Plate_4_J07
AHC0AAA5YK24
Plate: Plate_5_K24
AHC0AAA7YE06
Plate: Plate_7_E06
AHC0AAA30YF06
Plate: Plate_30_F06
AHC0AAA33YJ07
Plate: Plate_33_J07
AHC0AAA36YA14
Plate: Plate_36_A14
AHC0AAA47YH12
Plate: Plate_47_H12
AHC0AAA55YI17
Plate: Plate_55_I17
AHC0AAA61YB19
Plate: Plate_61_B19
AHC0AAA65YJ12
Plate: Plate_65_J12
AHC0AAA68YH15
Plate: Plate_68_H15
AHC0AAA104YG15
Plate: Plate_104_G15
AHC0AAA105YD16
Plate: Plate_105_D16
AHC0AAA108YD20
Plate: Plate_108_D20
AHC0AAA109YC22
Plate: Plate_109_C22
AHC0AAA109YL23
Plate: Plate_109_L23
AHC0AAA121YB09
Plate: Plate_121_B09
AHC0AAA121YG01
Plate: Plate_121_G01
AHC0AAA123YG18
Plate: Plate_123_G18
AHC0AAA126YH10
Plate: Plate_126_H10
AHC0AAA127YA14
Plate: Plate_127_A14
AHC0AAA128YP04
Plate: Plate_128_P04
AHC0AAA144YF01
Plate: Plate_144_F01
AHC0AAA156YE13
Plate: Plate_156_E13
AHC0AAA81YJ11
Plate: Plate_81_J11
AHC0AAA85YA07
Plate: Plate_85_A07
AHC0AAA97YL04
Plate: Plate_97_L04
AHC0AAA162YM18
Plate: Plate_162_M18
AHC0AAA164YB07
Plate: Plate_164_B07
AHC0AAA172YP10
Plate: Plate_172_P10
AHC0AAA198YK17
Plate: Plate_198_K17
AHC0AAA209YN11
Plate: Plate_209_N11
AHC0AAA212YK09
Plate: Plate_212_K09
AHC0AAA215YM09
Plate: Plate_215_M09
AHC0AAA220YF12
Plate: Plate_220_F12
AHC0AAA226YG07
Plate: Plate_226_G07
AHC0AAA240YD05
Plate: Plate_240_D05
AHC0AAA256YA22
Plate: Plate_256_A22
AHC0AAA258YI19
Plate: Plate_258_I19
AHC0AAA263YA12
Plate: Plate_263_A12
AHC0AAA55YK19
Plate: Plate_55_K19
n/a
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IPR Term | Analysis | Definition |
---|---|---|
tRNA_PsdUridine_synth_B_fam | TIGRFAM | tRNA pseudouridine synthase B family |
tRNA_PsdUridine_synth_B_fam | PANTHER | tRNA pseudouridine synthase B family |
PUA | Pfam | PUA domain |
PUA_sf | Gene3D | PUA domain superfamily |
PUA-like_sf | SUPERFAMILY | PUA-like superfamily |
Uncharacterised_CHP00451 | TIGRFAM | Uncharacterised domain CHP00451 |
PsdUridine_synth_cat_dom_sf | SUPERFAMILY | Pseudouridine synthase, catalytic domain superfamily |
TruB_C | Pfam | tRNA pseudouridylate synthase B, C-terminal |
PUA | SMART | PUA domain |
PUA | ProSiteProfiles | PUA domain |
PsdUridine_synth_N | Pfam | Pseudouridine synthase II, N-terminal |
Dyskerin-like | Pfam | Dyskerin-like |
Dyskerin-like | SMART | Dyskerin-like |
GO Term | Annotation Origin | Type |
---|---|---|
RNA binding | Orthology | molecular function |
protein binding | Orthology | molecular function |
nucleus | Orthology | cellular component |
nucleoplasm | Orthology | cellular component |
nucleolus | Orthology | cellular component |
cytoplasm | Orthology | cellular component |
mitochondrion | Blast | cellular component |
RNA processing | Orthology | biological process |
cell proliferation | Orthology | biological process |
membrane | Orthology | cellular component |
integral component of membrane | Orthology | cellular component |
RNA metabolic process | Orthology | biological process |
transferase activity, transferring phosphorus-containing groups | Orthology | molecular function |
DNA metabolic process | Orthology | biological process |
nuclear part | Orthology | cellular component |
macromolecular complex | Orthology | cellular component |
organelle organization | Orthology | biological process |
catalytic activity | Orthology | molecular function |
nuclear body | Orthology | cellular component |
mRNA metabolic process | Orthology | biological process |
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
---|---|---|
box H/ACA snoRNA 3'-end processing | Hs | biological process |
pseudouridine synthesis | Hs | biological process |
fibrillar center | Hs | cellular component |
telomerase activity | Hs | molecular function |
RNA binding | Hs | molecular function |
protein binding | Hs | molecular function |
nucleus | Hs | cellular component |
nucleoplasm | Hs | cellular component |
telomerase holoenzyme complex | Hs | cellular component |
nucleolus | Hs | cellular component |
cytoplasm | Hs | cellular component |
rRNA processing | Hs | biological process |
RNA processing | Hs | biological process |
telomere maintenance via telomerase | Hs | biological process |
cell proliferation | Hs | biological process |
RNA modification | Hs | biological process |
pseudouridine synthase activity | Hs | molecular function |
Cajal body | Hs | cellular component |
membrane | Hs | cellular component |
integral component of membrane | Hs | cellular component |
isomerase activity | Hs | molecular function |
intracellular ribonucleoprotein complex | Hs | cellular component |
rRNA pseudouridine synthesis | Hs | biological process |
snRNA pseudouridine synthesis | Hs | biological process |
box H/ACA snoRNP complex | Hs | cellular component |
positive regulation of telomere maintenance via telomerase | Hs | biological process |
box H/ACA snoRNA binding | Hs | molecular function |
ribosome biogenesis | Hs | biological process |
telomerase RNA binding | Hs | molecular function |
box H/ACA scaRNP complex | Hs | cellular component |
box H/ACA telomerase RNP complex | Hs | cellular component |
positive regulation of telomerase RNA localization to Cajal body | Hs | biological process |
mRNA pseudouridine synthesis | Hs | biological process |
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
---|---|---|---|---|
fibrillar center | Hs | cellular component | 635 | 0.0 |
telomerase activity | Hs | molecular function | 635 | 0.0 |
RNA binding | Hs | molecular function | 635 | 0.0 |
protein binding | Hs | molecular function | 635 | 0.0 |
nucleus | Hs | cellular component | 635 | 0.0 |
nucleoplasm | Hs | cellular component | 635 | 0.0 |
telomerase holoenzyme complex | Hs | cellular component | 635 | 0.0 |
nucleolus | Hs | cellular component | 635 | 0.0 |
cytoplasm | Hs | cellular component | 635 | 0.0 |
mitochondrion | Hs | cellular component | 67.4 | 3.16e-12 |
pseudouridine synthase activity | Hs | molecular function | 635 | 0.0 |
Cajal body | Hs | cellular component | 635 | 0.0 |
membrane | Hs | cellular component | 635 | 0.0 |
integral component of membrane | Hs | cellular component | 635 | 0.0 |
isomerase activity | Hs | molecular function | 635 | 0.0 |
intracellular ribonucleoprotein complex | Hs | cellular component | 635 | 0.0 |
box H/ACA snoRNP complex | Hs | cellular component | 635 | 0.0 |
box H/ACA snoRNA binding | Hs | molecular function | 635 | 0.0 |
telomerase RNA binding | Hs | molecular function | 635 | 0.0 |
box H/ACA scaRNP complex | Hs | cellular component | 635 | 0.0 |
box H/ACA telomerase RNP complex | Hs | cellular component | 635 | 0.0 |
GO Term | Analysis | Type | e-value |
---|---|---|---|
pseudouridine synthesis | SUPERFAMILY | biological process | 7.67E-77 |
RNA binding | SUPERFAMILY | molecular function | 7.67E-77 |
RNA processing | PANTHER | biological process | 1.5E-232 |
RNA modification | SUPERFAMILY | biological process | 7.67E-77 |
pseudouridine synthase activity | SUPERFAMILY | molecular function | 7.67E-77 |