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Gene Card

Best human hits

ACTA2; ACTB; ACTG1

Species

P.mammillata

Unique Gene ID

Phmamm.g00003942

Gene Model ID

Phmamm.CG.MTP2014.S134.g03942

Location

S134:158956..161607

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S134.g03942.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

4 results

AHC0AAA151YK20

Plate: Plate_151_K20

AHC0AAA222YP20

Plate: Plate_222_P20

AHC0AAA231YO16

Plate: Plate_231_O16

AHC0AAA259YO21

Plate: Plate_259_O21

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Actin_CS ProSitePatterns Actin, conserved site
Actin PRINTS Actin family
Actin/actin-like_CS ProSitePatterns Actin/actin-like conserved site
Actin Pfam Actin family
Actin SMART Actin family
Actin PANTHER Actin family

GOSlim

40 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding Blast molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
extracellular space Blast cellular component
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
cytosol Blast cellular component
cytoskeleton Blast cellular component
plasma membrane Blast cellular component
focal adhesion Blast cellular component
membrane Blast cellular component
protein kinase binding Blast molecular function
lamellipodium Blast cellular component
ubiquitin protein ligase binding Blast molecular function
vesicle Blast cellular component
macromolecular complex Blast cellular component
identical protein binding Blast molecular function
myelin sheath Blast cellular component
cell body Blast cellular component
extracellular exosome Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
nuclear lumen Blast cellular component
RNA polymerase II regulatory region sequence-specific DNA binding Blast molecular function
organelle organization Blast biological process
structural molecule activity Blast molecular function
cytoskeletal part Blast cellular component
cytoskeletal protein binding Blast molecular function
cytoplasmic part Blast cellular component
plasma membrane region Blast cellular component
cell projection Blast cellular component
organelle part Blast cellular component
transcription factor binding Blast molecular function
chromatin binding Blast molecular function
macromolecular complex binding Blast molecular function
DNA binding Blast molecular function
nucleoplasm part Blast cellular component
cytoplasmic vesicle Blast cellular component
enzyme binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

43 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 568 0.0
nuclear chromatin Hs cellular component 568 0.0
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 568 0.0
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function 568 0.0
structural constituent of cytoskeleton Hs molecular function 568 0.0
protein binding Hs molecular function 568 0.0
profilin binding Hs molecular function 566 0.0
ATP binding Hs molecular function 568 0.0
extracellular space Hs cellular component 568 0.0
nucleus Hs cellular component 568 0.0
nucleoplasm Hs cellular component 568 0.0
cytoplasm Hs cellular component 568 0.0
cytosol Hs cellular component 568 0.0
cytoskeleton Hs cellular component 568 0.0
actin filament Hs cellular component 566 0.0
plasma membrane Hs cellular component 568 0.0
focal adhesion Hs cellular component 568 0.0
actin cytoskeleton Hs cellular component 568 0.0
membrane Hs cellular component 568 0.0
kinesin binding Hs molecular function 568 0.0
protein kinase binding Hs molecular function 568 0.0
myofibril Hs cellular component 566 0.0
lamellipodium Hs cellular component 557 0.0
filopodium Hs cellular component 557 0.0
smooth muscle contractile fiber Hs cellular component 557 0.0
intracellular ribonucleoprotein complex Hs cellular component 568 0.0
Tat protein binding Hs molecular function 568 0.0
nucleosomal DNA binding Hs molecular function 568 0.0
ubiquitin protein ligase binding Hs molecular function 566 0.0
filamentous actin Hs cellular component 566 0.0
vesicle Hs cellular component 568 0.0
macromolecular complex Hs cellular component 568 0.0
NuA4 histone acetyltransferase complex Hs cellular component 568 0.0
cytoplasmic ribonucleoprotein granule Hs cellular component 568 0.0
identical protein binding Hs molecular function 568 0.0
myelin sheath Hs cellular component 566 0.0
cell body Hs cellular component 557 0.0
phagocytic vesicle Hs cellular component 566 0.0
nitric-oxide synthase binding Hs molecular function 568 0.0
extracellular exosome Hs cellular component 568 0.0
blood microparticle Hs cellular component 568 0.0
dense body Hs cellular component 568 0.0
structural constituent of postsynaptic actin cytoskeleton Hs molecular function 568 0.0

GO (InterProScan)

No result

GO Term Analysis Type e-value

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