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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S1...'

Gene Card

Best human hits

COL12A1; COL21A1; COL28A1

Species

P.mammillata

Unique Gene ID

Phmamm.g00014564

Gene Model ID

Phmamm.CG.MTP2014.S1352.g14564

Location

S1352:32804..38895

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S1352.g14564.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

3 results

AHC0AAA116YO11

Plate: Plate_116_O11

AHC0AAA182YP18

Plate: Plate_182_P18

AHC0AAA218YA03

Plate: Plate_218_A03

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
VWF_A Pfam von Willebrand factor, type A
vWFA_dom_sf Gene3D von Willebrand factor A-like domain superfamily
VWF_A SMART von Willebrand factor, type A
vWFA_dom_sf SUPERFAMILY von Willebrand factor A-like domain superfamily
VWF_A ProSiteProfiles von Willebrand factor, type A

GOSlim

15 results

GO Term Annotation Origin Type
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
cytoplasm Blast cellular component
endoplasmic reticulum lumen Blast cellular component
cytosol Blast cellular component
extracellular exosome Blast cellular component
extracellular vesicle Blast cellular component
enzyme regulator activity Blast molecular function
serine-type endopeptidase activity Blast molecular function
enzyme binding Blast molecular function
macromolecular complex Blast cellular component
extracellular region part Blast cellular component
structural molecule activity Blast molecular function
peptidase activity Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
serine-type endopeptidase inhibitor activity Hs molecular function 49.7 1.81e-06
protein binding Hs molecular function 50.1 1.85e-06
extracellular region Hs cellular component 61.2 4.38e-10
proteinaceous extracellular matrix Hs cellular component 61.2 4.38e-10
collagen trimer Hs cellular component 61.2 4.38e-10
collagen type XII trimer Hs cellular component 50.1 1.85e-06
basement membrane Hs cellular component 49.7 1.81e-06
extracellular space Hs cellular component 50.1 1.85e-06
cytoplasm Hs cellular component 61.2 4.38e-10
endoplasmic reticulum lumen Hs cellular component 61.2 4.38e-10
cytosol Hs cellular component 61.2 4.38e-10
extracellular matrix structural constituent conferring tensile strength Hs molecular function 50.1 1.85e-06
peptidase inhibitor activity Hs molecular function 49.7 1.81e-06
extracellular matrix Hs cellular component 61.2 4.38e-10
extracellular exosome Hs cellular component 50.1 1.85e-06
extracellular vesicle Hs cellular component 50.1 1.85e-06

GO (InterProScan)

No result

GO Term Analysis Type e-value