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GENE CARD

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Gene Card

Best human hits

DNAJC27; RAB4B; RAB4B-EGLN2

Species

P.mammillata

Unique Gene ID

Phmamm.g00014754

Gene Model ID

Phmamm.CG.MTP2014.S1420.g14754

Location

S1420:15769..16564

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S1420.g14754.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

1 result

AHC0AAA240YJ05

Plate: Plate_240_J05

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
DnaJ_domain CDD DnaJ domain
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
DnaJ_domain SMART DnaJ domain
DnaJ_domain Pfam DnaJ domain
Small_GTP-bd_dom TIGRFAM Small GTP-binding protein domain
J_dom_sf Gene3D Chaperone J-domain superfamily
Small_GTPase Pfam Small GTPase superfamily
DnaJ_domain PRINTS DnaJ domain
DnaJ_domain ProSiteProfiles DnaJ domain
J_dom_sf SUPERFAMILY Chaperone J-domain superfamily

GOSlim

18 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
GTPase activity Orthology molecular function
protein binding Orthology molecular function
GTP binding Orthology molecular function
nucleus Orthology cellular component
mitochondrion Orthology cellular component
plasma membrane Blast cellular component
membrane Blast cellular component
perinuclear region of cytoplasm Blast cellular component
intracellular signal transduction Orthology biological process
positive regulation of signal transduction Orthology biological process
protein phosphorylation Orthology biological process
intracellular organelle part Blast cellular component
whole membrane Blast cellular component
cytoplasmic vesicle Blast cellular component
endomembrane system Blast cellular component
bounding membrane of organelle Blast cellular component
endosome Blast cellular component

GO (Orthology)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
GTPase activity Hs molecular function
protein binding Hs molecular function
GTP binding Hs molecular function
nucleus Hs cellular component
mitochondrion Hs cellular component
positive regulation of MAPK cascade Hs biological process
positive regulation of ERK1 and ERK2 cascade Hs biological process

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 345 8.37e-121
GTPase activity Hs molecular function 345 8.37e-121
protein binding Hs molecular function 345 8.37e-121
GTP binding Hs molecular function 345 8.37e-121
nucleus Hs cellular component 345 8.37e-121
mitochondrion Hs cellular component 345 8.37e-121
plasma membrane Hs cellular component 102 2.03e-26
membrane Hs cellular component 102 2.03e-26
secretory granule membrane Hs cellular component 102 2.03e-26
insulin-responsive compartment Hs cellular component 102 2.03e-26
perinuclear region of cytoplasm Hs cellular component 102 2.03e-26
recycling endosome Hs cellular component 102 2.03e-26

GO (InterProScan)

2 results

GO Term Analysis Type e-value
GTPase activity Pfam molecular function 7.0E-39
GTP binding Pfam molecular function 7.0E-39