Aniseed - Gene card

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

45 results

AHC0AAA268YO06

Plate: Plate_268_O06

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
Znf_RING-CH	Pfam	Zinc finger, RING-CH-type
Znf_RING-CH	ProSiteProfiles	Zinc finger, RING-CH-type
Znf_RING-CH	SMART	Zinc finger, RING-CH-type
MARCH-like	PANTHER	E3 ubiquitin-protein ligase MARCH-like
Znf_RING/FYVE/PHD	Gene3D	Zinc finger, RING/FYVE/PHD-type

GOSlim

23 results

GO Term	Annotation Origin	Type
Golgi membrane	Blast	cellular component
protein polyubiquitination	Orthology	biological process
ubiquitin-protein transferase activity	Orthology	molecular function
protein binding	Orthology	molecular function
mitochondrion	Orthology	cellular component
endoplasmic reticulum	Orthology	cellular component
endoplasmic reticulum membrane	Orthology	cellular component
Golgi apparatus	Blast	cellular component
zinc ion binding	Orthology	molecular function
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
protein ubiquitination	Orthology	biological process
transferase activity	Orthology	molecular function
cytoplasmic vesicle	Blast	cellular component
metal ion binding	Orthology	molecular function
whole membrane	Orthology	cellular component
mitochondrial membrane	Orthology	cellular component
bounding membrane of organelle	Orthology	cellular component
enzyme binding	Orthology	molecular function
anatomical structure morphogenesis	Orthology	biological process
Golgi apparatus part	Blast	cellular component
intracellular organelle part	Blast	cellular component
organelle membrane	Blast	cellular component

GO (Orthology)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
protein polyubiquitination	Hs	biological process
ubiquitin-protein transferase activity	Hs	molecular function
protein binding	Hs	molecular function
mitochondrion	Hs	cellular component
mitochondrial outer membrane	Hs	cellular component
endoplasmic reticulum	Hs	cellular component
endoplasmic reticulum membrane	Hs	cellular component
zinc ion binding	Hs	molecular function
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
protein ubiquitination	Hs	biological process
transferase activity	Hs	molecular function
metal ion binding	Hs	molecular function
GTPase binding	Hs	molecular function
protein autoubiquitination	Hs	biological process
regulation of mitochondrial fission	Hs	biological process
positive regulation of mitochondrial fission	Hs	biological process
negative regulation of cell aging	Hs	biological process

GO (Blast)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
Golgi membrane	Hs	cellular component	45.4	2.79e-05
ubiquitin-protein transferase activity	Hs	molecular function	358	6.31e-125
protein binding	Hs	molecular function	358	6.31e-125
mitochondrion	Hs	cellular component	358	6.31e-125
mitochondrial outer membrane	Hs	cellular component	358	6.31e-125
endoplasmic reticulum	Hs	cellular component	358	6.31e-125
endoplasmic reticulum membrane	Hs	cellular component	358	6.31e-125
Golgi apparatus	Hs	cellular component	45.4	2.79e-05
Golgi stack	Hs	cellular component	45.4	2.79e-05
trans-Golgi network	Hs	cellular component	45.4	2.79e-05
zinc ion binding	Hs	molecular function	358	6.31e-125
membrane	Hs	cellular component	358	6.31e-125
integral component of membrane	Hs	cellular component	358	6.31e-125
transferase activity	Hs	molecular function	358	6.31e-125
cytoplasmic vesicle membrane	Hs	cellular component	48.5	2.69e-06
cytoplasmic vesicle	Hs	cellular component	48.5	2.69e-06
metal ion binding	Hs	molecular function	358	6.31e-125
GTPase binding	Hs	molecular function	358	6.31e-125

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
zinc ion binding	SMART	molecular function	2.5E-18

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences