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GENE CARD

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Gene Card

Best human hits

RPS2; STAG1

Species

P.mammillata

Unique Gene ID

Phmamm.g00004188

Gene Model ID

Phmamm.CG.MTP2014.S147.g04188

Location

S147:106603..109479

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

35 results

AHC0AAA10YE20

Plate: Plate_10_E20

AHC0AAA14YA13

Plate: Plate_14_A13

AHC0AAA19YM18

Plate: Plate_19_M18

AHC0AAA20YG15

Plate: Plate_20_G15

AHC0AAA20YJ23

Plate: Plate_20_J23

AHC0AAA21YI09

Plate: Plate_21_I09

AHC0AAA24YC07

Plate: Plate_24_C07

AHC0AAA31YL21

Plate: Plate_31_L21

AHC0AAA37YB16

Plate: Plate_37_B16

AHC0AAA41YM12

Plate: Plate_41_M12

AHC0AAA42YA14

Plate: Plate_42_A14

AHC0AAA44YI15

Plate: Plate_44_I15

AHC0AAA49YN01

Plate: Plate_49_N01

AHC0AAA55YN22

Plate: Plate_55_N22

AHC0AAA58YH18

Plate: Plate_58_H18

AHC0AAA59YI06

Plate: Plate_59_I06

AHC0AAA61YM24

Plate: Plate_61_M24

AHC0AAA77YE09

Plate: Plate_77_E09

AHC0AAA130YA17

Plate: Plate_130_A17

AHC0AAA135YC10

Plate: Plate_135_C10

AHC0AAA148YO08

Plate: Plate_148_O08

AHC0AAA152YI05

Plate: Plate_152_I05

AHC0AAA155YP13

Plate: Plate_155_P13

AHC0AAA156YD13

Plate: Plate_156_D13

AHC0AAA83YO18

Plate: Plate_83_O18

AHC0AAA85YG16

Plate: Plate_85_G16

AHC0AAA160YH14

Plate: Plate_160_H14

AHC0AAA165YJ23

Plate: Plate_165_J23

AHC0AAA185YL10

Plate: Plate_185_L10

AHC0AAA233YL07

Plate: Plate_233_L07

AHC0AAA236YI20

Plate: Plate_236_I20

AHC0AAA237YM23

Plate: Plate_237_M23

AHC0AAA244YA13

Plate: Plate_244_A13

AHC0AAA269YF17

Plate: Plate_269_F17

AHC0AAA55YP24

Plate: Plate_55_P24

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
Ribosomal_S5_N ProSiteProfiles Ribosomal protein S5, N-terminal
Ribosomal_S5 PANTHER Ribosomal protein S5
Ribosomal_S5_euk/arc TIGRFAM Ribosomal protein S5, eukaryotic/archaeal
Ribosomal_S5_N_CS ProSitePatterns Ribosomal protein S5, N-terminal, conserved site
Ribosomal_S5_C Pfam Ribosomal protein S5, C-terminal
Ribosomal_S5_D2-typ_fold_subgr Gene3D Ribosomal protein S5 domain 2-type fold, subgroup
Ribosomal_S5_N Pfam Ribosomal protein S5, N-terminal
Ribosomal_S5_D2-typ_fold SUPERFAMILY Ribosomal protein S5 domain 2-type fold

GOSlim

29 results

GO Term Annotation Origin Type
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay Orthology biological process
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Blast molecular function
chromatin binding Blast molecular function
RNA binding Orthology molecular function
structural constituent of ribosome Orthology molecular function
binding Blast molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytosol Orthology cellular component
ribosome Orthology cellular component
focal adhesion Orthology cellular component
translational initiation Orthology biological process
SRP-dependent cotranslational protein targeting to membrane Orthology biological process
membrane Orthology cellular component
nuclear body Blast cellular component
enzyme binding Orthology molecular function
extracellular exosome Orthology cellular component
RNA processing Orthology biological process
cellular protein modification process Orthology biological process
intracellular organelle part Orthology cellular component
cell adhesion molecule binding Orthology molecular function
positive regulation of catalytic activity Orthology biological process
ubiquitin-protein transferase activity Orthology molecular function
intracellular non-membrane-bounded organelle Blast cellular component
macromolecular complex Blast cellular component
nuclear lumen Blast cellular component
cytoskeletal part Blast cellular component
microtubule cytoskeleton Blast cellular component

GO (Orthology)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay Hs biological process
RNA binding Hs molecular function
mRNA binding Hs molecular function
structural constituent of ribosome Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytosol Hs cellular component
ribosome Hs cellular component
focal adhesion Hs cellular component
rRNA processing Hs biological process
translation Hs biological process
translational initiation Hs biological process
protein methylation Hs biological process
SRP-dependent cotranslational protein targeting to membrane Hs biological process
small ribosomal subunit Hs cellular component
membrane Hs cellular component
fibroblast growth factor binding Hs molecular function
enzyme binding Hs molecular function
cytosolic small ribosomal subunit Hs cellular component
intracellular ribonucleoprotein complex Hs cellular component
cadherin binding Hs molecular function
positive regulation of ubiquitin-protein transferase activity Hs biological process
extracellular exosome Hs cellular component

GO (Blast)

27 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
chromosome, centromeric region Hs cellular component 37.0 0.010
chromatin Hs cellular component 37.0 0.010
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 37.0 0.010
chromatin binding Hs molecular function 37.0 0.010
RNA binding Hs molecular function 409 7.05e-146
mRNA binding Hs molecular function 409 7.05e-146
structural constituent of ribosome Hs molecular function 409 7.05e-146
binding Hs molecular function 37.0 0.010
protein binding Hs molecular function 409 7.05e-146
nucleus Hs cellular component 409 7.05e-146
nucleoplasm Hs cellular component 409 7.05e-146
chromosome Hs cellular component 37.0 0.010
cytosol Hs cellular component 409 7.05e-146
ribosome Hs cellular component 409 7.05e-146
focal adhesion Hs cellular component 409 7.05e-146
cohesin complex Hs cellular component 37.0 0.010
small ribosomal subunit Hs cellular component 409 7.05e-146
membrane Hs cellular component 409 7.05e-146
nuclear matrix Hs cellular component 37.0 0.010
nuclear body Hs cellular component 37.0 0.010
fibroblast growth factor binding Hs molecular function 409 7.05e-146
enzyme binding Hs molecular function 409 7.05e-146
cytosolic small ribosomal subunit Hs cellular component 409 7.05e-146
intracellular ribonucleoprotein complex Hs cellular component 409 7.05e-146
cadherin binding Hs molecular function 409 7.05e-146
extracellular exosome Hs cellular component 409 7.05e-146
mitotic spindle pole Hs cellular component 37.0 0.010

GO (InterProScan)

5 results

GO Term Analysis Type e-value
RNA binding Pfam molecular function 5.6E-30
structural constituent of ribosome PANTHER molecular function 2.3E-123
ribosome PANTHER cellular component 2.3E-123
translation PANTHER biological process 2.3E-123
small ribosomal subunit TIGRFAM cellular component 2.5E-95