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GENE CARD

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Gene Card

Best human hits

ELP3; RSAD1

Species

P.mammillata

Unique Gene ID

Phmamm.g00004200

Gene Model ID

Phmamm.CG.MTP2014.S147.g04200

Location

S147:190652..192713

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S147.g04200.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

38 results

AHC0AAA15YD07

Plate: Plate_15_D07

AHC0AAA26YN09

Plate: Plate_26_N09

AHC0AAA4YO01

Plate: Plate_4_O01

AHC0AAA31YM08

Plate: Plate_31_M08

AHC0AAA39YA20

Plate: Plate_39_A20

AHC0AAA39YL18

Plate: Plate_39_L18

AHC0AAA52YF18

Plate: Plate_52_F18

AHC0AAA53YD09

Plate: Plate_53_D09

AHC0AAA69YJ17

Plate: Plate_69_J17

AHC0AAA69YO09

Plate: Plate_69_O09

AHC0AAA72YK10

Plate: Plate_72_K10

AHC0AAA74YL09

Plate: Plate_74_L09

AHC0AAA76YM21

Plate: Plate_76_M21

AHC0AAA101YH01

Plate: Plate_101_H01

AHC0AAA114YG15

Plate: Plate_114_G15

AHC0AAA124YO20

Plate: Plate_124_O20

AHC0AAA149YF15

Plate: Plate_149_F15

AHC0AAA155YH24

Plate: Plate_155_H24

AHC0AAA155YK18

Plate: Plate_155_K18

AHC0AAA82YA11

Plate: Plate_82_A11

AHC0AAA84YJ01

Plate: Plate_84_J01

AHC0AAA89YL19

Plate: Plate_89_L19

AHC0AAA186YL17

Plate: Plate_186_L17

AHC0AAA187YD06

Plate: Plate_187_D06

AHC0AAA192YF21

Plate: Plate_192_F21

AHC0AAA196YH18

Plate: Plate_196_H18

AHC0AAA201YH06

Plate: Plate_201_H06

AHC0AAA201YH21

Plate: Plate_201_H21

AHC0AAA205YN12

Plate: Plate_205_N12

AHC0AAA217YE19

Plate: Plate_217_E19

AHC0AAA221YP23

Plate: Plate_221_P23

AHC0AAA231YA18

Plate: Plate_231_A18

AHC0AAA241YI04

Plate: Plate_241_I04

AHC0AAA244YH04

Plate: Plate_244_H04

AHC0AAA249YF02

Plate: Plate_249_F02

AHC0AAA262YF06

Plate: Plate_262_F06

AHC0AAA39YA18

Plate: Plate_39_A18

AHC0AAA39YN20

Plate: Plate_39_N20

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term Analysis Definition
GNAT_dom Pfam GNAT domain
rSAM_horseshoe Gene3D Radical SAM, alpha/beta horseshoe
Elp3/MiaB/NifB SMART Elp3/MiaB/NifB
Acyl_CoA_acyltransferase SUPERFAMILY Acyl-CoA N-acyltransferase
ELP3-like PANTHER Elongator complex protein 3-like
rSAM Pfam Radical SAM
Radical_SAM_C Pfam Radical SAM, C-terminal extension
ELP3-like SFLD Elongator complex protein 3-like
ELP3-like TIGRFAM Elongator complex protein 3-like
ELP3-like PIRSF Elongator complex protein 3-like
GNAT_dom ProSiteProfiles GNAT domain

GOSlim

30 results

GO Term Annotation Origin Type
catalytic activity Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleolus Orthology cellular component
cytoplasm Orthology cellular component
mitochondrion Blast cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
regulation of transcription from RNA polymerase II promoter Orthology biological process
nervous system development Orthology biological process
central nervous system development Orthology biological process
transferase activity Orthology molecular function
metal ion binding Orthology molecular function
oxidation-reduction process Blast biological process
nucleoplasm part Orthology cellular component
macromolecular complex Orthology cellular component
enzyme binding Orthology molecular function
cell migration Orthology biological process
generation of neurons Orthology biological process
organelle organization Orthology biological process
cellular protein modification process Orthology biological process
transcription from RNA polymerase II promoter Orthology biological process
protein kinase binding Orthology molecular function
protein serine/threonine kinase activity Orthology molecular function
regulation of cellular metabolic process Orthology biological process
enzyme regulator activity Orthology molecular function
intracellular part Orthology cellular component
regulation of catalytic activity Orthology biological process
protein kinase activity Orthology molecular function
cofactor binding Orthology molecular function

GO (Orthology)

30 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
histone acetyltransferase complex Hs cellular component
RNA polymerase II core binding Hs molecular function
neuron migration Hs biological process
catalytic activity Hs molecular function
histone acetyltransferase activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleolus Hs cellular component
cytoplasm Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
transcription elongation from RNA polymerase II promoter Hs biological process
nervous system development Hs biological process
central nervous system development Hs biological process
transcription elongation factor complex Hs cellular component
N-acetyltransferase activity Hs molecular function
phosphorylase kinase regulator activity Hs molecular function
H3 histone acetyltransferase activity Hs molecular function
H4 histone acetyltransferase activity Hs molecular function
histone acetylation Hs biological process
transferase activity Hs molecular function
transferase activity, transferring acyl groups Hs molecular function
positive regulation of cell migration Hs biological process
Elongator holoenzyme complex Hs cellular component
histone H3 acetylation Hs biological process
histone H4 acetylation Hs biological process
regulation of protein kinase activity Hs biological process
metal ion binding Hs molecular function
iron-sulfur cluster binding Hs molecular function

GO (Blast)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
histone acetyltransferase complex Hs cellular component 934 0.0
RNA polymerase II core binding Hs molecular function 934 0.0
catalytic activity Hs molecular function 934 0.0
coproporphyrinogen oxidase activity Hs molecular function 41.2 0.001
histone acetyltransferase activity Hs molecular function 934 0.0
protein binding Hs molecular function 934 0.0
nucleus Hs cellular component 934 0.0
nucleolus Hs cellular component 934 0.0
cytoplasm Hs cellular component 934 0.0
mitochondrion Hs cellular component 41.2 0.001
transcription elongation factor complex Hs cellular component 934 0.0
N-acetyltransferase activity Hs molecular function 934 0.0
phosphorylase kinase regulator activity Hs molecular function 934 0.0
H3 histone acetyltransferase activity Hs molecular function 934 0.0
H4 histone acetyltransferase activity Hs molecular function 934 0.0
oxidoreductase activity Hs molecular function 41.2 0.001
transferase activity Hs molecular function 934 0.0
transferase activity, transferring acyl groups Hs molecular function 934 0.0
Elongator holoenzyme complex Hs cellular component 934 0.0
metal ion binding Hs molecular function 934 0.0
iron-sulfur cluster binding Hs molecular function 934 0.0
4 iron, 4 sulfur cluster binding Hs molecular function 41.2 0.001

GO (InterProScan)

2 results

GO Term Analysis Type e-value
catalytic activity SMART molecular function 2.1E-33
iron-sulfur cluster binding SMART molecular function 2.1E-33