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GENE CARD

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Gene Card

Best human hits

SLC3A1; SLC3A2

Species

P.mammillata

Unique Gene ID

Phmamm.g00014957

Gene Model ID

Phmamm.CG.MTP2014.S1497.g14957

Location

S1497:4931..7458

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S1497.g14957.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

19 results

AHC0AAA10YK02

Plate: Plate_10_K02

AHC0AAA3YH12

Plate: Plate_3_H12

AHC0AAA6YK24

Plate: Plate_6_K24

AHC0AAA31YH24

Plate: Plate_31_H24

AHC0AAA38YI02

Plate: Plate_38_I02

AHC0AAA40YI01

Plate: Plate_40_I01

AHC0AAA101YE24

Plate: Plate_101_E24

AHC0AAA112YJ14

Plate: Plate_112_J14

AHC0AAA133YG06

Plate: Plate_133_G06

AHC0AAA134YD12

Plate: Plate_134_D12

AHC0AAA135YB19

Plate: Plate_135_B19

AHC0AAA99YE22

Plate: Plate_99_E22

AHC0AAA133YI08

Plate: Plate_133_I08

AHC0AAA183YI07

Plate: Plate_183_I07

AHC0AAA209YE05

Plate: Plate_209_E05

AHC0AAA217YP14

Plate: Plate_217_P14

AHC0AAA227YN05

Plate: Plate_227_N05

AHC0AAA251YG01

Plate: Plate_251_G01

AHC0AAA38YK04

Plate: Plate_38_K04

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
SLC3A2_N Pfam Solute carrier family 3 member 2, N-terminal domain
Glycoside_hydrolase_SF SUPERFAMILY Glycoside hydrolase superfamily
Glyco_hydro_13_cat_dom Pfam Glycosyl hydrolase, family 13, catalytic domain
Glyco_hydro_b Gene3D Glycosyl hydrolase, all-beta
Glyco_hydro_13_cat_dom SMART Glycosyl hydrolase, family 13, catalytic domain

GOSlim

28 results

GO Term Annotation Origin Type
RNA binding Orthology molecular function
catalytic activity Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
mitochondrial inner membrane Blast cellular component
vacuolar membrane Blast cellular component
cytosol Orthology cellular component
plasma membrane Orthology cellular component
integral component of plasma membrane Blast cellular component
cell surface Orthology cellular component
membrane Orthology cellular component
integral component of membrane Orthology cellular component
apical plasma membrane Orthology cellular component
brush border membrane Blast cellular component
melanosome Orthology cellular component
protein heterodimerization activity Blast molecular function
extracellular exosome Orthology cellular component
transmembrane transport Orthology biological process
sodium ion transport Orthology biological process
organic substance metabolic process Orthology biological process
metal ion transport Orthology biological process
organic substance transport Orthology biological process
ion transport Orthology biological process
cellular process Orthology biological process
response to organic substance Orthology biological process
cell adhesion molecule binding Orthology molecular function
cell migration Orthology biological process
immune system process Orthology biological process

GO (Orthology)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
RNA binding Hs molecular function
double-stranded RNA binding Hs molecular function
catalytic activity Hs molecular function
calcium:sodium antiporter activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
carbohydrate metabolic process Hs biological process
calcium ion transport Hs biological process
amino acid transport Hs biological process
cell surface Hs cellular component
neutral amino acid transmembrane transporter activity Hs molecular function
membrane Hs cellular component
integral component of membrane Hs cellular component
cell growth Hs biological process
apical plasma membrane Hs cellular component
sodium ion transmembrane transport Hs biological process
melanosome Hs cellular component
response to exogenous dsRNA Hs biological process
cadherin binding Hs molecular function
leukocyte migration Hs biological process
extracellular exosome Hs cellular component
L-alpha-amino acid transmembrane transport Hs biological process

GO (Blast)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA binding Hs molecular function 91.7 2.11e-19
double-stranded RNA binding Hs molecular function 91.7 2.11e-19
catalytic activity Hs molecular function 91.7 2.11e-19
calcium:sodium antiporter activity Hs molecular function 91.7 2.11e-19
protein binding Hs molecular function 91.7 2.11e-19
nucleus Hs cellular component 91.7 2.11e-19
mitochondrial inner membrane Hs cellular component 80.1 9.63e-16
vacuolar membrane Hs cellular component 80.1 9.63e-16
cytosol Hs cellular component 91.7 2.11e-19
plasma membrane Hs cellular component 91.7 2.11e-19
integral component of plasma membrane Hs cellular component 80.1 9.63e-16
cell surface Hs cellular component 91.7 2.11e-19
amino acid transmembrane transporter activity Hs molecular function 80.1 9.63e-16
basic amino acid transmembrane transporter activity Hs molecular function 80.1 9.63e-16
neutral amino acid transmembrane transporter activity Hs molecular function 91.7 2.11e-19
L-cystine transmembrane transporter activity Hs molecular function 80.1 9.63e-16
membrane Hs cellular component 91.7 2.11e-19
integral component of membrane Hs cellular component 91.7 2.11e-19
apical plasma membrane Hs cellular component 91.7 2.11e-19
brush border membrane Hs cellular component 80.1 9.63e-16
melanosome Hs cellular component 91.7 2.11e-19
cadherin binding Hs molecular function 91.7 2.11e-19
protein heterodimerization activity Hs molecular function 80.1 9.63e-16
extracellular exosome Hs cellular component 91.7 2.11e-19

GO (InterProScan)

2 results

GO Term Analysis Type e-value
catalytic activity Pfam molecular function 2.3E-13
carbohydrate metabolic process Pfam biological process 2.3E-13

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