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GENE CARD

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Gene Card

Best human hits

ZNF143; ZNF76; ZNF878

Species

P.mammillata

Unique Gene ID

Phmamm.g00004517

Gene Model ID

Phmamm.CG.MTP2014.S162.g04517

Location

S162:141520..142179

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S162.g04517.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

13 results

AHC0AAA55YP07

Plate: Plate_55_P07

AHC0AAA70YC20

Plate: Plate_70_C20

AHC0AAA123YM19

Plate: Plate_123_M19

AHC0AAA132YA08

Plate: Plate_132_A08

AHC0AAA137YK06

Plate: Plate_137_K06

AHC0AAA146YN19

Plate: Plate_146_N19

AHC0AAA81YB17

Plate: Plate_81_B17

AHC0AAA96YD08

Plate: Plate_96_D08

AHC0AAA162YH19

Plate: Plate_162_H19

AHC0AAA205YA20

Plate: Plate_205_A20

AHC0AAA219YD10

Plate: Plate_219_D10

AHC0AAA227YF22

Plate: Plate_227_F22

AHC0AAA55YP05

Plate: Plate_55_P05

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type
Znf_C2H2_type SMART Zinc finger C2H2-type
Znf_C2H2_type Pfam Zinc finger C2H2-type

GOSlim

13 results

GO Term Annotation Origin Type
RNA polymerase II core promoter proximal region sequence-specific DNA binding Blast molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Blast molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Blast molecular function
nucleic acid binding Orthology molecular function
DNA binding Blast molecular function
protein binding Blast molecular function
intracellular Orthology cellular component
nucleus Blast cellular component
nucleoplasm Blast cellular component
regulation of transcription, DNA-templated Orthology biological process
sequence-specific DNA binding Blast molecular function
metal ion binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Orthology molecular function

GO (Orthology)

4 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleic acid binding Hs molecular function
intracellular Hs cellular component
regulation of transcription, DNA-templated Hs biological process
transcription factor activity, sequence-specific DNA binding Hs molecular function

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 235 4.15e-75
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 245 1.09e-79
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 235 4.15e-75
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 245 1.09e-79
nucleic acid binding Hs molecular function 245 1.09e-79
DNA binding Hs molecular function 245 1.09e-79
protein binding Hs molecular function 235 4.15e-75
intracellular Hs cellular component 143 5.76e-41
nucleus Hs cellular component 245 1.09e-79
nucleoplasm Hs cellular component 235 4.15e-75
sequence-specific DNA binding Hs molecular function 245 1.09e-79
metal ion binding Hs molecular function 245 1.09e-79

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding Pfam molecular function 9.0E-7