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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S1...'

Gene Card

Best human hits

CARF

Species

P.mammillata

Unique Gene ID

Phmamm.g00015456

Gene Model ID

Phmamm.CG.MTP2014.S1693.g15456

Location

S1693:26217..28399

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S1693.g15456.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

15 results

AHC0AAA29YK24

Plate: Plate_29_K24

AHC0AAA33YI05

Plate: Plate_33_I05

AHC0AAA48YE03

Plate: Plate_48_E03

AHC0AAA101YB05

Plate: Plate_101_B05

AHC0AAA111YG11

Plate: Plate_111_G11

AHC0AAA114YB13

Plate: Plate_114_B13

AHC0AAA86YO07

Plate: Plate_86_O07

AHC0AAA159YP19

Plate: Plate_159_P19

AHC0AAA175YI08

Plate: Plate_175_I08

AHC0AAA177YM24

Plate: Plate_177_M24

AHC0AAA196YE17

Plate: Plate_196_E17

AHC0AAA221YM20

Plate: Plate_221_M20

AHC0AAA224YB20

Plate: Plate_224_B20

AHC0AAA248YE22

Plate: Plate_248_E22

AHC0AAA260YB02

Plate: Plate_260_B02

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term Analysis Definition
CaRF Pfam Calcium-responsive transcription factor

GOSlim

6 results

GO Term Annotation Origin Type
RNA polymerase II core promoter proximal region sequence-specific DNA binding Blast molecular function
DNA binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
nucleolus Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

7 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 68.6 2.31e-12
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 68.6 2.31e-12
DNA binding Hs molecular function 68.6 2.31e-12
transcription factor activity, sequence-specific DNA binding Hs molecular function 68.6 2.31e-12
nucleus Hs cellular component 68.6 2.31e-12
nucleoplasm Hs cellular component 68.6 2.31e-12
nucleolus Hs cellular component 68.6 2.31e-12

GO (InterProScan)

No result

GO Term Analysis Type e-value