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GENE CARD

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Gene Card

Best human hits

COL12A1; COL14A1; COL6A5

Species

P.mammillata

Unique Gene ID

Phmamm.g00004683

Gene Model ID

Phmamm.CG.MTP2014.S171.g04683

Location

S171:183457..185930

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S171.g04683.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
vWFA_dom_sf SUPERFAMILY von Willebrand factor A-like domain superfamily
vWFA_dom_sf Gene3D von Willebrand factor A-like domain superfamily
VWF_A ProSiteProfiles von Willebrand factor, type A
VWF_A Pfam von Willebrand factor, type A

GOSlim

11 results

GO Term Annotation Origin Type
RNA binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
endoplasmic reticulum lumen Blast cellular component
extracellular exosome Blast cellular component
extracellular vesicle Blast cellular component
extracellular region part Blast cellular component
structural molecule activity Blast molecular function
macromolecular complex binding Blast molecular function
macromolecular complex Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 58.5 2.89e-10
extracellular matrix structural constituent Hs molecular function 58.5 2.89e-10
protein binding Hs molecular function 59.3 1.43e-10
collagen binding Hs molecular function 58.5 2.89e-10
extracellular region Hs cellular component 59.3 1.43e-10
proteinaceous extracellular matrix Hs cellular component 59.3 1.43e-10
collagen trimer Hs cellular component 59.3 1.43e-10
collagen type XII trimer Hs cellular component 59.3 1.43e-10
collagen type XIV trimer Hs cellular component 58.5 2.89e-10
extracellular space Hs cellular component 59.3 1.43e-10
endoplasmic reticulum lumen Hs cellular component 59.3 1.43e-10
extracellular matrix structural constituent conferring tensile strength Hs molecular function 59.3 1.43e-10
protein binding, bridging Hs molecular function 58.5 2.89e-10
extracellular matrix Hs cellular component 59.3 1.43e-10
extracellular exosome Hs cellular component 59.3 1.43e-10
extracellular vesicle Hs cellular component 59.3 1.43e-10

GO (InterProScan)

No result

GO Term Analysis Type e-value