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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S1...'

Gene Card

Best human hits

AL359736.1; ARHGEF9; SPATA13

Species

P.mammillata

Unique Gene ID

Phmamm.g00004804

Gene Model ID

Phmamm.CG.MTP2014.S178.g04804

Location

S178:40100..59341

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

38 results

AHC0AAA10YG20

Plate: Plate_10_G20

AHC0AAA18YE20

Plate: Plate_18_E20

AHC0AAA20YF16

Plate: Plate_20_F16

AHC0AAA29YH20

Plate: Plate_29_H20

AHC0AAA30YM05

Plate: Plate_30_M05

AHC0AAA43YA17

Plate: Plate_43_A17

AHC0AAA64YC16

Plate: Plate_64_C16

AHC0AAA70YC17

Plate: Plate_70_C17

AHC0AAA77YI24

Plate: Plate_77_I24

AHC0AAA108YM15

Plate: Plate_108_M15

AHC0AAA113YB01

Plate: Plate_113_B01

AHC0AAA117YL17

Plate: Plate_117_L17

AHC0AAA119YG23

Plate: Plate_119_G23

AHC0AAA130YA09

Plate: Plate_130_A09

AHC0AAA133YG02

Plate: Plate_133_G02

AHC0AAA142YJ03

Plate: Plate_142_J03

AHC0AAA145YC08

Plate: Plate_145_C08

AHC0AAA83YJ06

Plate: Plate_83_J06

AHC0AAA84YJ03

Plate: Plate_84_J03

AHC0AAA86YD01

Plate: Plate_86_D01

AHC0AAA88YA21

Plate: Plate_88_A21

AHC0AAA93YG09

Plate: Plate_93_G09

AHC0AAA95YL12

Plate: Plate_95_L12

AHC0AAA133YI04

Plate: Plate_133_I04

AHC0AAA158YD05

Plate: Plate_158_D05

AHC0AAA160YI21

Plate: Plate_160_I21

AHC0AAA175YA02

Plate: Plate_175_A02

AHC0AAA191YD11

Plate: Plate_191_D11

AHC0AAA193YB08

Plate: Plate_193_B08

AHC0AAA196YA01

Plate: Plate_196_A01

AHC0AAA212YG21

Plate: Plate_212_G21

AHC0AAA212YJ14

Plate: Plate_212_J14

AHC0AAA212YK07

Plate: Plate_212_K07

AHC0AAA218YI10

Plate: Plate_218_I10

AHC0AAA224YM08

Plate: Plate_224_M08

AHC0AAA248YA20

Plate: Plate_248_A20

AHC0AAA251YF11

Plate: Plate_251_F11

AHC0AAA262YF23

Plate: Plate_262_F23

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

15 results

IPR Term Analysis Definition
PH_domain Pfam Pleckstrin homology domain
DH-domain Pfam Dbl homology (DH) domain
SH3-like_dom_sf SUPERFAMILY SH3-like domain superfamily
SH3_domain ProSiteProfiles SH3 domain
SH3_domain SMART SH3 domain
DBL_dom_sf SUPERFAMILY Dbl homology (DH) domain superfamily
DH-domain ProSiteProfiles Dbl homology (DH) domain
GDS_CDC24_CS ProSitePatterns Guanine-nucleotide dissociation stimulator, CDC24, conserved site
SH3_domain Pfam SH3 domain
PH_domain SMART Pleckstrin homology domain
DBL_dom_sf Gene3D Dbl homology (DH) domain superfamily
PH_domain ProSiteProfiles Pleckstrin homology domain
PH-like_dom_sf Gene3D PH-like domain superfamily
DH-domain SMART Dbl homology (DH) domain
DH-domain CDD Dbl homology (DH) domain

GOSlim

23 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
plasma membrane Orthology cellular component
G-protein coupled receptor signaling pathway Orthology biological process
membrane Orthology cellular component
cell migration Orthology biological process
lamellipodium Orthology cellular component
cell projection Orthology cellular component
positive regulation of apoptotic process Orthology biological process
regulation of molecular function Orthology biological process
intracellular signal transduction Orthology biological process
intracellular Orthology cellular component
enzyme binding Orthology molecular function
molecular function regulator Orthology molecular function
cell projection assembly Orthology biological process
plasma membrane region Orthology cellular component
cytoskeletal part Orthology cellular component
cell projection membrane Orthology cellular component
cell leading edge Orthology cellular component
small GTPase mediated signal transduction Orthology biological process
regulation of signal transduction Orthology biological process

GO (Orthology)

25 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
guanyl-nucleotide exchange factor activity Hs molecular function
Rho guanyl-nucleotide exchange factor activity Hs molecular function
protein binding Hs molecular function
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
G-protein coupled receptor signaling pathway Hs biological process
membrane Hs cellular component
cell migration Hs biological process
lamellipodium Hs cellular component
lamellipodium assembly Hs biological process
filopodium Hs cellular component
regulation of cell migration Hs biological process
Rac guanyl-nucleotide exchange factor activity Hs molecular function
ruffle membrane Hs cellular component
regulation of Rho protein signal transduction Hs biological process
cell projection Hs cellular component
positive regulation of apoptotic process Hs biological process
filopodium assembly Hs biological process
regulation of small GTPase mediated signal transduction Hs biological process
regulation of molecular function Hs biological process
intracellular signal transduction Hs biological process
intracellular Hs cellular component
protein domain specific binding Hs molecular function

GO (Blast)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
guanyl-nucleotide exchange factor activity Hs molecular function 442 7.14e-138
Rho guanyl-nucleotide exchange factor activity Hs molecular function 442 7.14e-138
protein binding Hs molecular function 442 7.14e-138
nucleoplasm Hs cellular component 372 1.30e-106
cytoplasm Hs cellular component 442 7.14e-138
cytosol Hs cellular component 442 7.14e-138
plasma membrane Hs cellular component 372 1.30e-106
membrane Hs cellular component 372 1.30e-106
lamellipodium Hs cellular component 372 1.30e-106
filopodium Hs cellular component 372 1.30e-106
Rac guanyl-nucleotide exchange factor activity Hs molecular function 372 1.30e-106
ruffle membrane Hs cellular component 372 1.30e-106
cell projection Hs cellular component 372 1.30e-106

GO (InterProScan)

5 results

GO Term Analysis Type e-value
guanyl-nucleotide exchange factor activity ProSitePatterns molecular function
Rho guanyl-nucleotide exchange factor activity SMART molecular function 1.6E-56
protein binding SUPERFAMILY molecular function 8.79E-21
regulation of Rho protein signal transduction SMART biological process 1.6E-56
intracellular signal transduction ProSitePatterns biological process