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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S4...'

Gene Card

Best human hits

IVNS1ABP; KLHL20; KLHL24

Species

P.mammillata

Unique Gene ID

Phmamm.g00004831

Gene Model ID

Phmamm.CG.MTP2014.S179.g04831

Location

S179:139096..142522

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S179.g04831.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

4 results

AHC0AAA101YB18

Plate: Plate_101_B18

AHC0AAA111YH02

Plate: Plate_111_H02

AHC0AAA194YC23

Plate: Plate_194_C23

AHC0AAA258YF04

Plate: Plate_258_F04

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
BTB/POZ_dom SMART BTB/POZ domain
BTB/POZ_dom Pfam BTB/POZ domain
SKP1/BTB/POZ_sf SUPERFAMILY SKP1/BTB/POZ domain superfamily
BTB/POZ_dom ProSiteProfiles BTB/POZ domain

GOSlim

26 results

GO Term Annotation Origin Type
actin binding Blast molecular function
ubiquitin-protein transferase activity Blast molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
Golgi apparatus Blast cellular component
cytosol Orthology cellular component
cytoskeleton Orthology cellular component
adherens junction Blast cellular component
RNA splicing Orthology biological process
cell junction Blast cellular component
axon Blast cellular component
cell projection Blast cellular component
negative regulation of apoptotic process Orthology biological process
perinuclear region of cytoplasm Blast cellular component
intracellular part Orthology cellular component
macromolecular complex Orthology cellular component
nuclear part Orthology cellular component
transcription, DNA-templated Orthology biological process
intracellular signal transduction Orthology biological process
negative regulation of signal transduction Orthology biological process
Golgi apparatus part Blast cellular component
nuclear body Blast cellular component
anchoring junction Blast cellular component
neuronal cell body Blast cellular component

GO (Orthology)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
transcription factor complex Hs cellular component
spliceosomal complex Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
transcription from RNA polymerase III promoter Hs biological process
RNA splicing Hs biological process
response to virus Hs biological process
actin cytoskeleton Hs cellular component
viral process Hs biological process
negative regulation of intrinsic apoptotic signaling pathway Hs biological process

GO (Blast)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
actin binding Hs molecular function 79.0 9.15e-16
ubiquitin-protein transferase activity Hs molecular function 79.0 9.15e-16
protein binding Hs molecular function 117 2.26e-28
nucleus Hs cellular component 117 2.26e-28
nucleoplasm Hs cellular component 117 2.26e-28
transcription factor complex Hs cellular component 117 2.26e-28
spliceosomal complex Hs cellular component 117 2.26e-28
cytoplasm Hs cellular component 117 2.26e-28
Golgi apparatus Hs cellular component 79.0 9.15e-16
trans-Golgi network Hs cellular component 79.0 9.15e-16
cytosol Hs cellular component 117 2.26e-28
cytoskeleton Hs cellular component 117 2.26e-28
adherens junction Hs cellular component 71.6 2.32e-13
actin cytoskeleton Hs cellular component 117 2.26e-28
PML body Hs cellular component 79.0 9.15e-16
interferon-gamma binding Hs molecular function 79.0 9.15e-16
cell junction Hs cellular component 71.6 2.32e-13
desmosome Hs cellular component 71.6 2.32e-13
axon Hs cellular component 79.0 9.15e-16
dendrite Hs cellular component 79.0 9.15e-16
Cul3-RING ubiquitin ligase complex Hs cellular component 79.0 9.15e-16
cell projection Hs cellular component 79.0 9.15e-16
perikaryon Hs cellular component 71.6 2.32e-13
perinuclear region of cytoplasm Hs cellular component 79.0 9.15e-16

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Pfam molecular function 2.6E-16