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GENE CARD

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Gene Card

Best human hits

SEPT2; SEPT4; SEPT5

Species

P.mammillata

Unique Gene ID

Phmamm.g00004990

Gene Model ID

Phmamm.CG.MTP2014.S186.g04990

Location

S186:157722..165689

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

22 results

AHC0AAA15YJ01

Plate: Plate_15_J01

AHC0AAA2YI06

Plate: Plate_2_I06

AHC0AAA23YB17

Plate: Plate_23_B17

AHC0AAA25YN14

Plate: Plate_25_N14

AHC0AAA6YB14

Plate: Plate_6_B14

AHC0AAA28YH22

Plate: Plate_28_H22

AHC0AAA53YL04

Plate: Plate_53_L04

AHC0AAA101YG02

Plate: Plate_101_G02

AHC0AAA111YF23

Plate: Plate_111_F23

AHC0AAA112YJ23

Plate: Plate_112_J23

AHC0AAA120YO20

Plate: Plate_120_O20

AHC0AAA142YE02

Plate: Plate_142_E02

AHC0AAA149YI12

Plate: Plate_149_I12

AHC0AAA158YC20

Plate: Plate_158_C20

AHC0AAA162YD24

Plate: Plate_162_D24

AHC0AAA174YO06

Plate: Plate_174_O06

AHC0AAA239YB02

Plate: Plate_239_B02

AHC0AAA241YP18

Plate: Plate_241_P18

AHC0AAA245YA17

Plate: Plate_245_A17

AHC0AAA256YC11

Plate: Plate_256_C11

AHC0AAA257YJ20

Plate: Plate_257_J20

AHC0AAA260YI10

Plate: Plate_260_I10

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Septin CDD Septin
G_SEPTIN_dom ProSiteProfiles Septin-type guanine nucleotide-binding (G) domain
G_SEPTIN_dom Pfam Septin-type guanine nucleotide-binding (G) domain
Septin PIRSF Septin
Septin2 PRINTS Septin 2
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase

GOSlim

46 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
magnesium ion binding Blast molecular function
GTPase activity Blast molecular function
structural molecule activity Blast molecular function
protein binding Orthology molecular function
GTP binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Blast cellular component
cytoplasm Orthology cellular component
mitochondrion Blast cellular component
cytoskeleton Orthology cellular component
plasma membrane Orthology cellular component
cell cycle Orthology biological process
spermatogenesis Orthology biological process
membrane Orthology cellular component
cell differentiation Orthology biological process
midbody Orthology cellular component
neuron projection development Orthology biological process
protein homodimerization activity Blast molecular function
cell projection Orthology cellular component
myelin sheath Blast cellular component
perinuclear region of cytoplasm Orthology cellular component
regulation of catalytic activity Orthology biological process
cell division Orthology biological process
extracellular exosome Orthology cellular component
cytoplasmic part Orthology cellular component
cell periphery Orthology cellular component
macromolecular complex Orthology cellular component
intracellular organelle part Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
cytoskeletal part Orthology cellular component
microtubule cytoskeleton Orthology cellular component
cell projection part Orthology cellular component
microtubule Orthology cellular component
plasma membrane region Orthology cellular component
cell surface receptor signaling pathway Orthology biological process
organelle part Orthology cellular component
neuron projection Orthology cellular component
cell adhesion molecule binding Orthology molecular function
cell projection membrane Orthology cellular component
bounding membrane of organelle Orthology cellular component
organelle Orthology cellular component
cytoplasmic vesicle Blast cellular component
synapse part Blast cellular component
endomembrane system Blast cellular component
neuron part Blast cellular component

GO (Orthology)

35 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
exocyst Hs cellular component
nucleotide binding Hs molecular function
chromosome, centromeric region Hs cellular component
kinetochore Hs cellular component
condensed chromosome kinetochore Hs cellular component
protein binding Hs molecular function
GTP binding Hs molecular function
nucleus Hs cellular component
chromosome Hs cellular component
cytoplasm Hs cellular component
spindle Hs cellular component
cytoskeleton Hs cellular component
plasma membrane Hs cellular component
axoneme Hs cellular component
cell cortex Hs cellular component
cell cycle Hs biological process
smoothened signaling pathway Hs biological process
spermatogenesis Hs biological process
membrane Hs cellular component
cell differentiation Hs biological process
midbody Hs cellular component
septin complex Hs cellular component
neuron projection development Hs biological process
cleavage furrow Hs cellular component
photoreceptor connecting cilium Hs cellular component
cell projection Hs cellular component
cadherin binding Hs molecular function
perinuclear region of cytoplasm Hs cellular component
regulation of catalytic activity Hs biological process
cell division Hs biological process
ciliary membrane Hs cellular component
cilium assembly Hs biological process
extracellular exosome Hs cellular component
sperm annulus Hs cellular component
non-motile cilium Hs cellular component

GO (Blast)

37 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
exocyst Hs cellular component 478 1.96e-170
nucleotide binding Hs molecular function 478 1.96e-170
magnesium ion binding Hs molecular function 408 1.32e-141
chromosome, centromeric region Hs cellular component 478 1.96e-170
kinetochore Hs cellular component 478 1.96e-170
condensed chromosome kinetochore Hs cellular component 478 1.96e-170
GTPase activity Hs molecular function 408 1.32e-141
structural molecule activity Hs molecular function 408 1.32e-141
protein binding Hs molecular function 478 1.96e-170
GTP binding Hs molecular function 478 1.96e-170
nucleus Hs cellular component 478 1.96e-170
nucleoplasm Hs cellular component 408 1.32e-141
chromosome Hs cellular component 478 1.96e-170
cytoplasm Hs cellular component 478 1.96e-170
mitochondrion Hs cellular component 408 1.32e-141
spindle Hs cellular component 478 1.96e-170
cytoskeleton Hs cellular component 478 1.96e-170
plasma membrane Hs cellular component 478 1.96e-170
axoneme Hs cellular component 478 1.96e-170
cell cortex Hs cellular component 478 1.96e-170
synaptic vesicle Hs cellular component 399 2.05e-139
membrane Hs cellular component 478 1.96e-170
midbody Hs cellular component 478 1.96e-170
septin complex Hs cellular component 478 1.96e-170
motile cilium Hs cellular component 408 1.32e-141
cleavage furrow Hs cellular component 478 1.96e-170
photoreceptor connecting cilium Hs cellular component 478 1.96e-170
sperm flagellum Hs cellular component 408 1.32e-141
protein homodimerization activity Hs molecular function 408 1.32e-141
cell projection Hs cellular component 478 1.96e-170
myelin sheath Hs cellular component 408 1.32e-141
cadherin binding Hs molecular function 478 1.96e-170
perinuclear region of cytoplasm Hs cellular component 478 1.96e-170
ciliary membrane Hs cellular component 478 1.96e-170
extracellular exosome Hs cellular component 478 1.96e-170
sperm annulus Hs cellular component 478 1.96e-170
non-motile cilium Hs cellular component 478 1.96e-170

GO (InterProScan)

3 results

GO Term Analysis Type e-value
GTP binding CDD molecular function 1.36643E-158
cell cycle PRINTS biological process 5.4E-7
cell division PRINTS biological process 5.4E-7