Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

AACS; ACSBG1; SLC27A4

Species

P.mammillata

Unique Gene ID

Phmamm.g00005038

Gene Model ID

Phmamm.CG.MTP2014.S189.g05038

Location

S189:157382..159701

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S189.g05038.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
AMP-dep_Synth/Lig Pfam AMP-dependent synthetase/ligase
AMP-binding_CS ProSitePatterns AMP-binding, conserved site

GOSlim

24 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
catalytic activity Blast molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
cytoplasm Blast cellular component
endoplasmic reticulum Blast cellular component
endoplasmic reticulum membrane Blast cellular component
cytosol Blast cellular component
plasma membrane Blast cellular component
metabolic process InterProScan biological process
membrane Blast cellular component
integral component of membrane Blast cellular component
ligase activity Blast molecular function
cytoplasmic vesicle Blast cellular component
brush border membrane Blast cellular component
intracellular membrane-bounded organelle Blast cellular component
cellular metabolic process Blast biological process
organic substance metabolic process Blast biological process
plasma membrane region Blast cellular component
cell projection Blast cellular component
cytoskeletal part Blast cellular component
organic substance transport Blast biological process
ion transport Blast biological process
transmembrane transport Blast biological process

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 56.2 1.80e-09
catalytic activity Hs molecular function 56.2 1.80e-09
long-chain fatty acid-CoA ligase activity Hs molecular function 55.1 4.48e-09
protein binding Hs molecular function 56.2 1.80e-09
ATP binding Hs molecular function 56.2 1.80e-09
cytoplasm Hs cellular component 56.2 1.80e-09
endoplasmic reticulum Hs cellular component 55.1 4.48e-09
endoplasmic reticulum membrane Hs cellular component 53.1 2.06e-08
cytosol Hs cellular component 56.2 1.80e-09
plasma membrane Hs cellular component 53.1 2.06e-08
microvillus Hs cellular component 53.1 2.06e-08
fatty acid transporter activity Hs molecular function 53.1 2.06e-08
membrane Hs cellular component 53.1 2.06e-08
integral component of membrane Hs cellular component 53.1 2.06e-08
ligase activity Hs molecular function 56.2 1.80e-09
acetoacetate-CoA ligase activity Hs molecular function 56.2 1.80e-09
cytoplasmic vesicle Hs cellular component 55.1 4.48e-09
brush border membrane Hs cellular component 53.1 2.06e-08
very long-chain fatty acid-CoA ligase activity Hs molecular function 55.1 4.48e-09
intracellular membrane-bounded organelle Hs cellular component 55.1 4.48e-09
butyrate-CoA ligase activity Hs molecular function 56.2 1.80e-09
decanoate--CoA ligase activity Hs molecular function 55.1 4.48e-09

GO (InterProScan)

2 results

GO Term Analysis Type e-value
catalytic activity Pfam molecular function 1.0E-33
metabolic process Pfam biological process 1.0E-33