Aniseed - Gene card

Gene Card

Best human hits

RAB10; RAB8A; RAB8B

Species

P.mammillata

Unique Gene ID

Phmamm.g00005121

Gene Model ID

Phmamm.CG.MTP2014.S194.g05121

Location

S194:61383..63898

Transcript Models and Sequences

Phmamm.CG.MTP2014.S194.g05121.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
Small_GTP-bd_dom	TIGRFAM	Small GTP-binding protein domain
Small_GTPase	Pfam	Small GTPase superfamily
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase

GOSlim

69 results

GO Term	Annotation Origin	Type
G2/M transition of mitotic cell cycle	Orthology	biological process
Golgi membrane	Orthology	cellular component
nucleotide binding	Orthology	molecular function
GTPase activity	Orthology	molecular function
receptor binding	Blast	molecular function
protein binding	Orthology	molecular function
GTP binding	Orthology	molecular function
nucleoplasm	Blast	cellular component
cytoplasm	Orthology	cellular component
mitochondrion	Blast	cellular component
endosome	Orthology	cellular component
endoplasmic reticulum	Blast	cellular component
endoplasmic reticulum membrane	Blast	cellular component
Golgi apparatus	Orthology	cellular component
centrosome	Orthology	cellular component
cytosol	Orthology	cellular component
cytoskeleton	Orthology	cellular component
plasma membrane	Orthology	cellular component
focal adhesion	Blast	cellular component
axonogenesis	Orthology	biological process
protein transport	Orthology	biological process
membrane	Orthology	cellular component
nuclear body	Blast	cellular component
protein kinase binding	Orthology	molecular function
cell projection organization	Orthology	biological process
cytoplasmic vesicle	Orthology	cellular component
cell projection	Orthology	cellular component
neuronal cell body	Orthology	cellular component
intracellular membrane-bounded organelle	Blast	cellular component
perinuclear region of cytoplasm	Blast	cellular component
extracellular exosome	Orthology	cellular component
cytoplasmic part	Orthology	cellular component
microtubule organizing center	Orthology	cellular component
organelle	Orthology	cellular component
plasma membrane region	Orthology	cellular component
macromolecular complex	Orthology	cellular component
membrane organization	Orthology	biological process
organelle organization	Orthology	biological process
synapse part	Orthology	cellular component
endomembrane system	Orthology	cellular component
neuron part	Orthology	cellular component
cellular process	Orthology	biological process
regulation of cellular metabolic process	Orthology	biological process
postsynapse	Orthology	cellular component
enzyme binding	Orthology	molecular function
anion binding	Orthology	molecular function
guanyl ribonucleotide binding	Orthology	molecular function
purine ribonucleoside binding	Orthology	molecular function
intracellular organelle part	Orthology	cellular component
whole membrane	Orthology	cellular component
bounding membrane of organelle	Orthology	cellular component
cytoskeletal protein binding	Orthology	molecular function
cellular response to organic substance	Orthology	biological process
protein localization	Orthology	biological process
cell projection part	Orthology	cellular component
cellular protein modification process	Orthology	biological process
chemical synaptic transmission	Orthology	biological process
regulation of signaling	Orthology	biological process
protein localization to membrane	Orthology	biological process
organelle part	Orthology	cellular component
cell periphery	Blast	cellular component
peroxisome	Blast	cellular component
Golgi apparatus part	Blast	cellular component
adherens junction	Blast	cellular component
organelle membrane	Blast	cellular component
cell part	Blast	cellular component
endoplasmic reticulum part	Blast	cellular component
cell adhesion molecule binding	Blast	molecular function
cell adhesion	Blast	biological process

GO (Orthology)

53 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
G2/M transition of mitotic cell cycle	Hs	biological process
Golgi membrane	Hs	cellular component
nucleotide binding	Hs	molecular function
GTPase activity	Hs	molecular function
protein binding	Hs	molecular function
GTP binding	Hs	molecular function
cytoplasm	Hs	cellular component
endosome	Hs	cellular component
Golgi apparatus	Hs	cellular component
centrosome	Hs	cellular component
centriole	Hs	cellular component
cytosol	Hs	cellular component
cytoskeleton	Hs	cellular component
plasma membrane	Hs	cellular component
cilium	Hs	cellular component
vesicle docking involved in exocytosis	Hs	biological process
autophagy	Hs	biological process
axonogenesis	Hs	biological process
synaptic vesicle	Hs	cellular component
protein secretion	Hs	biological process
regulation of autophagy	Hs	biological process
postsynaptic density	Hs	cellular component
protein transport	Hs	biological process
membrane	Hs	cellular component
Rab GTPase binding	Hs	molecular function
regulation of exocytosis	Hs	biological process
GDP binding	Hs	molecular function
protein kinase binding	Hs	molecular function
cell projection organization	Hs	biological process
trans-Golgi network transport vesicle	Hs	cellular component
dendrite	Hs	cellular component
secretory granule membrane	Hs	cellular component
phagocytic vesicle membrane	Hs	cellular component
cytoplasmic vesicle	Hs	cellular component
myosin V binding	Hs	molecular function
trans-Golgi network membrane	Hs	cellular component
cellular response to insulin stimulus	Hs	biological process
regulation of protein localization	Hs	biological process
ciliary basal body	Hs	cellular component
cell projection	Hs	cellular component
neuronal cell body	Hs	cellular component
dendritic spine	Hs	cellular component
post-translational protein modification	Hs	biological process
phagocytic vesicle	Hs	cellular component
regulation of long-term neuronal synaptic plasticity	Hs	biological process
regulation of protein transport	Hs	biological process
recycling endosome	Hs	cellular component
recycling endosome membrane	Hs	cellular component
cilium assembly	Hs	biological process
extracellular exosome	Hs	cellular component
protein localization to plasma membrane	Hs	biological process
ciliary base	Hs	cellular component
non-motile cilium	Hs	cellular component

GO (Blast)

58 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
Golgi membrane	Hs	cellular component	330	1.98e-116
exocyst	Hs	cellular component	270	7.45e-93
nucleotide binding	Hs	molecular function	330	1.98e-116
GTPase activity	Hs	molecular function	330	1.98e-116
receptor binding	Hs	molecular function	325	1.75e-114
protein binding	Hs	molecular function	330	1.98e-116
GTP binding	Hs	molecular function	330	1.98e-116
nucleoplasm	Hs	cellular component	325	1.75e-114
cytoplasm	Hs	cellular component	330	1.98e-116
mitochondrion	Hs	cellular component	325	1.75e-114
endosome	Hs	cellular component	330	1.98e-116
peroxisomal membrane	Hs	cellular component	325	1.75e-114
endoplasmic reticulum	Hs	cellular component	270	7.45e-93
endoplasmic reticulum membrane	Hs	cellular component	270	7.45e-93
Golgi apparatus	Hs	cellular component	330	1.98e-116
trans-Golgi network	Hs	cellular component	270	7.45e-93
centrosome	Hs	cellular component	330	1.98e-116
centriole	Hs	cellular component	330	1.98e-116
cytosol	Hs	cellular component	330	1.98e-116
cytoskeleton	Hs	cellular component	330	1.98e-116
plasma membrane	Hs	cellular component	330	1.98e-116
cell-cell adherens junction	Hs	cellular component	270	7.45e-93
focal adhesion	Hs	cellular component	270	7.45e-93
cilium	Hs	cellular component	330	1.98e-116
synaptic vesicle	Hs	cellular component	330	1.98e-116
endosome membrane	Hs	cellular component	270	7.45e-93
postsynaptic density	Hs	cellular component	330	1.98e-116
membrane	Hs	cellular component	330	1.98e-116
nuclear body	Hs	cellular component	325	1.75e-114
Rab GTPase binding	Hs	molecular function	330	1.98e-116
GDP binding	Hs	molecular function	330	1.98e-116
protein kinase binding	Hs	molecular function	330	1.98e-116
trans-Golgi network transport vesicle	Hs	cellular component	330	1.98e-116
dendrite	Hs	cellular component	330	1.98e-116
cytoplasmic vesicle membrane	Hs	cellular component	270	7.45e-93
secretory granule membrane	Hs	cellular component	330	1.98e-116
phagocytic vesicle membrane	Hs	cellular component	330	1.98e-116
TPR domain binding	Hs	molecular function	325	1.75e-114
cytoplasmic vesicle	Hs	cellular component	330	1.98e-116
myosin V binding	Hs	molecular function	330	1.98e-116
trans-Golgi network membrane	Hs	cellular component	330	1.98e-116
insulin-responsive compartment	Hs	cellular component	270	7.45e-93
ciliary basal body	Hs	cellular component	330	1.98e-116
cell projection	Hs	cellular component	330	1.98e-116
neuronal cell body	Hs	cellular component	330	1.98e-116
dendritic spine	Hs	cellular component	330	1.98e-116
intracellular membrane-bounded organelle	Hs	cellular component	325	1.75e-114
phagocytic vesicle	Hs	cellular component	330	1.98e-116
perinuclear region of cytoplasm	Hs	cellular component	325	1.75e-114
cell tip	Hs	cellular component	325	1.75e-114
recycling endosome	Hs	cellular component	330	1.98e-116
recycling endosome membrane	Hs	cellular component	330	1.98e-116
extracellular exosome	Hs	cellular component	330	1.98e-116
exocytic vesicle	Hs	cellular component	270	7.45e-93
endoplasmic reticulum tubular network	Hs	cellular component	270	7.45e-93
ciliary base	Hs	cellular component	330	1.98e-116
non-motile cilium	Hs	cellular component	330	1.98e-116
cadherin binding involved in cell-cell adhesion	Hs	molecular function	270	7.45e-93

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
GTPase activity	Pfam	molecular function	4.5E-66
GTP binding	Pfam	molecular function	4.5E-66