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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S4...' > 
  2. Gene 'Phmamm.CG.MTP2014.S1...'

Gene Card

Best human hits

CARF

Species

P.mammillata

Unique Gene ID

Phmamm.g00015934

Gene Model ID

Phmamm.CG.MTP2014.S1940.g15934

Location

S1940:16644..23718

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S1940.g15934.01.t
Phmamm.CG.MTP2014.S1940.g15934.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

17 results

AHC0AAA25YL08

Plate: Plate_25_L08

AHC0AAA32YB21

Plate: Plate_32_B21

AHC0AAA34YK04

Plate: Plate_34_K04

AHC0AAA44YM12

Plate: Plate_44_M12

AHC0AAA62YA21

Plate: Plate_62_A21

AHC0AAA62YM21

Plate: Plate_62_M21

AHC0AAA73YA22

Plate: Plate_73_A22

AHC0AAA109YP05

Plate: Plate_109_P05

AHC0AAA112YC06

Plate: Plate_112_C06

AHC0AAA120YE07

Plate: Plate_120_E07

AHC0AAA121YB24

Plate: Plate_121_B24

AHC0AAA207YK16

Plate: Plate_207_K16

AHC0AAA220YE02

Plate: Plate_220_E02

AHC0AAA235YB21

Plate: Plate_235_B21

AHC0AAA237YH08

Plate: Plate_237_H08

AHC0AAA242YA01

Plate: Plate_242_A01

AHC0AAA256YD14

Plate: Plate_256_D14

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term Analysis Definition
CaRF Pfam Calcium-responsive transcription factor

GOSlim

6 results

GO Term Annotation Origin Type
RNA polymerase II core promoter proximal region sequence-specific DNA binding Blast molecular function
DNA binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
nucleolus Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

7 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 56.2 2.38e-08
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 56.2 2.38e-08
DNA binding Hs molecular function 56.2 2.38e-08
transcription factor activity, sequence-specific DNA binding Hs molecular function 56.2 2.38e-08
nucleus Hs cellular component 56.2 2.38e-08
nucleoplasm Hs cellular component 56.2 2.38e-08
nucleolus Hs cellular component 56.2 2.38e-08

GO (InterProScan)

No result

GO Term Analysis Type e-value

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