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GENE CARD

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Gene Card

Best human hits

MYH11; MYO18A; MYO18B

Species

P.mammillata

Unique Gene ID

Phmamm.g00015969

Gene Model ID

Phmamm.CG.MTP2014.S1961.g15969

Location

S1961:10090..23983

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S1961.g15969.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

11 results

AHC0AAA12YD03

Plate: Plate_12_D03

AHC0AAA13YD09

Plate: Plate_13_D09

AHC0AAA21YK01

Plate: Plate_21_K01

AHC0AAA79YJ12

Plate: Plate_79_J12

AHC0AAA134YB13

Plate: Plate_134_B13

AHC0AAA143YM22

Plate: Plate_143_M22

AHC0AAA81YA01

Plate: Plate_81_A01

AHC0AAA94YK07

Plate: Plate_94_K07

AHC0AAA98YH12

Plate: Plate_98_H12

AHC0AAA190YN13

Plate: Plate_190_N13

AHC0AAA98YH10

Plate: Plate_98_H10

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
MYO18A PANTHER Unconventional myosin-XVIIIa
Myosin_head_motor_dom Pfam Myosin head, motor domain
Myosin_head_motor_dom ProSiteProfiles Myosin head, motor domain
Myosin_head_motor_dom SMART Myosin head, motor domain
IQ_motif_EF-hand-BS SMART IQ motif, EF-hand binding site
Kinesin_motor_dom_sf Gene3D Kinesin motor domain superfamily
Myosin_IQ_contain_sf Gene3D Myosin IQ motif-containing domain superfamily
Myosin_tail Pfam Myosin tail
IQ_motif_EF-hand-BS ProSiteProfiles IQ motif, EF-hand binding site

GOSlim

33 results

GO Term Annotation Origin Type
Golgi membrane Blast cellular component
nucleotide binding Blast molecular function
DNA binding Blast molecular function
RNA binding Blast molecular function
motor activity Blast molecular function
microtubule motor activity Blast molecular function
actin binding Blast molecular function
protein binding Blast molecular function
calmodulin binding Blast molecular function
ATP binding Blast molecular function
nucleus Blast cellular component
cytoplasm Blast cellular component
Golgi apparatus Blast cellular component
cytosol Blast cellular component
cytoskeleton Blast cellular component
microtubule-based movement InterProScan biological process
microtubule binding Blast molecular function
cell surface Blast cellular component
membrane Blast cellular component
melanosome Blast cellular component
actin filament binding Blast molecular function
extracellular exosome Blast cellular component
cytoplasmic part Blast cellular component
intracellular membrane-bounded organelle Blast cellular component
Golgi apparatus part Blast cellular component
cytoskeletal part Blast cellular component
macromolecular complex Blast cellular component
nucleoside-triphosphatase activity Blast molecular function
structural molecule activity Blast molecular function
organelle part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
anion binding Blast molecular function
adenyl ribonucleotide binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

32 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 1093 0.0
nucleotide binding Hs molecular function 1093 0.0
DNA binding Hs molecular function 1093 0.0
RNA binding Hs molecular function 1093 0.0
motor activity Hs molecular function 1093 0.0
microtubule motor activity Hs molecular function 1093 0.0
actin binding Hs molecular function 1093 0.0
protein binding Hs molecular function 1093 0.0
calmodulin binding Hs molecular function 437 2.83e-124
ATP binding Hs molecular function 1093 0.0
nucleus Hs cellular component 714 0.0
cytoplasm Hs cellular component 1093 0.0
endoplasmic reticulum-Golgi intermediate compartment Hs cellular component 1093 0.0
Golgi apparatus Hs cellular component 1093 0.0
trans-Golgi network Hs cellular component 1093 0.0
cytosol Hs cellular component 437 2.83e-124
cytoskeleton Hs cellular component 1093 0.0
muscle myosin complex Hs cellular component 437 2.83e-124
microtubule binding Hs molecular function 1093 0.0
DNA-dependent ATPase activity Hs molecular function 1093 0.0
structural constituent of muscle Hs molecular function 437 2.83e-124
cell surface Hs cellular component 1093 0.0
membrane Hs cellular component 1093 0.0
myosin complex Hs cellular component 1093 0.0
unconventional myosin complex Hs cellular component 714 0.0
sarcomere Hs cellular component 714 0.0
myosin filament Hs cellular component 437 2.83e-124
melanosome Hs cellular component 437 2.83e-124
actomyosin Hs cellular component 1093 0.0
ADP binding Hs molecular function 1093 0.0
actin filament binding Hs molecular function 1093 0.0
extracellular exosome Hs cellular component 437 2.83e-124

GO (InterProScan)

8 results

GO Term Analysis Type e-value
motor activity Pfam molecular function 1.4E-95
microtubule motor activity Gene3D molecular function 1.2E-103
protein binding SMART molecular function 0.039
ATP binding Gene3D molecular function 1.2E-103
microtubule-based movement Gene3D biological process 1.2E-103
microtubule binding Gene3D molecular function 1.2E-103
myosin complex Pfam cellular component 1.4E-95
actin filament binding PANTHER molecular function 0.0