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  1. Gene 'Boschl.CG.Botznik201...' > 
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Gene Card

Best human hits

BTRC; FBXW11; FBXW7

Species

P.mammillata

Unique Gene ID

Phmamm.g00000835

Gene Model ID

Phmamm.CG.MTP2014.S20.g00835

Location

S20:55786..70359

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S20.g00835.01.t
Phmamm.CG.MTP2014.S20.g00835.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

10 results

AHC0AAA13YM02

Plate: Plate_13_M02

AHC0AAA3YF03

Plate: Plate_3_F03

AHC0AAA62YF09

Plate: Plate_62_F09

AHC0AAA65YG15

Plate: Plate_65_G15

AHC0AAA111YF18

Plate: Plate_111_F18

AHC0AAA81YC13

Plate: Plate_81_C13

AHC0AAA87YE19

Plate: Plate_87_E19

AHC0AAA181YN19

Plate: Plate_181_N19

AHC0AAA193YB06

Plate: Plate_193_B06

AHC0AAA230YG11

Plate: Plate_230_G11

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

12 results

IPR Term Analysis Definition
WD40_repeat ProSiteProfiles WD40 repeat
WD40_repeat Pfam WD40 repeat
WD40_repeat_CS ProSitePatterns WD40 repeat, conserved site
F-box-like_dom_sf SUPERFAMILY F-box-like domain superfamily
WD40_repeat_dom_sf SUPERFAMILY WD40-repeat-containing domain superfamily
G-protein_beta_WD-40_rep PRINTS G-protein beta WD-40 repeat
WD40/YVTN_repeat-like_dom_sf Gene3D WD40/YVTN repeat-like-containing domain superfamily
F-box_dom ProSiteProfiles F-box domain
F-box_dom SMART F-box domain
WD40_repeat_dom ProSiteProfiles WD40-repeat-containing domain
WD40_repeat SMART WD40 repeat
F-box_dom Pfam F-box domain

GOSlim

15 results

GO Term Annotation Origin Type
ubiquitin-protein transferase activity Blast molecular function
protein binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
nucleolus Blast cellular component
cytoplasm Blast cellular component
centrosome Blast cellular component
cytosol Blast cellular component
ligase activity Blast molecular function
ubiquitin protein ligase binding Blast molecular function
identical protein binding Blast molecular function
protein dimerization activity Blast molecular function
intracellular part Blast cellular component
macromolecular complex Blast cellular component
enzyme regulator activity Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
ubiquitin ligase complex Hs cellular component 244 5.16e-72
ubiquitin-protein transferase activity Hs molecular function 770 0.0
protein binding Hs molecular function 770 0.0
nucleus Hs cellular component 770 0.0
nucleoplasm Hs cellular component 770 0.0
nucleolus Hs cellular component 770 0.0
cytoplasm Hs cellular component 770 0.0
centrosome Hs cellular component 244 5.16e-72
cytosol Hs cellular component 770 0.0
beta-catenin binding Hs molecular function 246 5.08e-72
ligase activity Hs molecular function 246 5.08e-72
SCF ubiquitin ligase complex Hs cellular component 770 0.0
cyclin binding Hs molecular function 770 0.0
protein binding, bridging Hs molecular function 770 0.0
ubiquitin protein ligase binding Hs molecular function 770 0.0
identical protein binding Hs molecular function 770 0.0
protein phosphorylated amino acid binding Hs molecular function 246 5.08e-72
protein dimerization activity Hs molecular function 246 5.08e-72
phosphothreonine residue binding Hs molecular function 770 0.0
ubiquitin protein ligase activity Hs molecular function 246 5.08e-72
ubiquitin-protein transferase activator activity Hs molecular function 770 0.0
Parkin-FBXW7-Cul1 ubiquitin ligase complex Hs cellular component 770 0.0

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Gene3D molecular function 3.8E-125

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