Gene Card
Best human hits
RPL17; RPL17-C18orf32
Species
Unique Gene ID
Phmamm.g00005244
Gene Model ID
Phmamm.CG.MTP2014.S201.g05244
Location
S201:30870..33278
Transcript Models and Sequences
Phmamm.CG.MTP2014.S201.g05244.01.t
Phmamm.CG.MTP2014.S201.g05244.02.t
Phmamm.CG.MTP2014.S201.g05244.03.t
Genoscope Yasuo Villefranche
7 results
AHC0AAA11YI18
Plate: Plate_11_I18
AHC0AAA60YO18
Plate: Plate_60_O18
AHC0AAA72YK21
Plate: Plate_72_K21
AHC0AAA119YI16
Plate: Plate_119_I16
AHC0AAA159YO09
Plate: Plate_159_O09
AHC0AAA182YB06
Plate: Plate_182_B06
AHC0AAA214YI15
Plate: Plate_214_I15
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
7 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Ribosomal_L22/L17_euk/arc | TIGRFAM | Ribosomal protein L22/L17, eukaryotic/archaeal |
| Ribosomal_L22/L17_CS | ProSitePatterns | Ribosomal protein L22/L17, conserved site |
| Ribosomal_L22/L17_sf | SUPERFAMILY | Ribosomal protein L22/L17 superfamily |
| Ribosomal_L22/L17_euk/arc | PANTHER | Ribosomal protein L22/L17, eukaryotic/archaeal |
| Ribosomal_L22 | CDD | Ribosomal protein L22/L17 |
| Ribosomal_L22/L17_sf | Gene3D | Ribosomal protein L22/L17 superfamily |
| Ribosomal_L22 | Pfam | Ribosomal protein L22/L17 |
GOSlim
12 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Orthology | biological process |
| RNA binding | Orthology | molecular function |
| structural constituent of ribosome | Orthology | molecular function |
| protein binding | Orthology | molecular function |
| intracellular | Orthology | cellular component |
| nucleus | Orthology | cellular component |
| cytosol | Orthology | cellular component |
| ribosome | Orthology | cellular component |
| translational initiation | Orthology | biological process |
| SRP-dependent cotranslational protein targeting to membrane | Orthology | biological process |
| RNA processing | Orthology | biological process |
| intracellular organelle part | Orthology | cellular component |
GO (Orthology)
15 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Hs | biological process |
| RNA binding | Hs | molecular function |
| structural constituent of ribosome | Hs | molecular function |
| protein binding | Hs | molecular function |
| intracellular | Hs | cellular component |
| nucleus | Hs | cellular component |
| cytosol | Hs | cellular component |
| ribosome | Hs | cellular component |
| rRNA processing | Hs | biological process |
| translation | Hs | biological process |
| translational initiation | Hs | biological process |
| SRP-dependent cotranslational protein targeting to membrane | Hs | biological process |
| large ribosomal subunit | Hs | cellular component |
| cytosolic large ribosomal subunit | Hs | cellular component |
| intracellular ribonucleoprotein complex | Hs | cellular component |
GO (Blast)
10 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| RNA binding | Hs | molecular function | 300 | 1.47e-105 |
| structural constituent of ribosome | Hs | molecular function | 303 | 2.89e-106 |
| protein binding | Hs | molecular function | 300 | 1.47e-105 |
| intracellular | Hs | cellular component | 303 | 2.89e-106 |
| nucleus | Hs | cellular component | 300 | 1.47e-105 |
| cytosol | Hs | cellular component | 300 | 1.47e-105 |
| ribosome | Hs | cellular component | 303 | 2.89e-106 |
| large ribosomal subunit | Hs | cellular component | 303 | 2.89e-106 |
| cytosolic large ribosomal subunit | Hs | cellular component | 300 | 1.47e-105 |
| intracellular ribonucleoprotein complex | Hs | cellular component | 303 | 2.89e-106 |
GO (InterProScan)
5 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| structural constituent of ribosome | PANTHER | molecular function | 3.5E-100 |
| intracellular | ProSitePatterns | cellular component | |
| ribosome | Gene3D | cellular component | 7.9E-84 |
| translation | PANTHER | biological process | 3.5E-100 |
| large ribosomal subunit | PANTHER | cellular component | 3.5E-100 |
