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GENE CARD

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Gene Card

Best human hits

LRP5; LRP6

Species

P.mammillata

Unique Gene ID

Phmamm.g00005510

Gene Model ID

Phmamm.CG.MTP2014.S214.g05510

Location

S214:95970..111487

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S214.g05510.01.t
Phmamm.CG.MTP2014.S214.g05510.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

3 results

AHC0AAA44YF21

Plate: Plate_44_F21

AHC0AAA131YK04

Plate: Plate_131_K04

AHC0AAA193YF15

Plate: Plate_193_F15

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

14 results

IPR Term Analysis Definition
LDLR_classB_rpt ProSiteProfiles LDLR class B repeat
EGF-like_dom SMART EGF-like domain
LDLR_classB_rpt SMART LDLR class B repeat
6-blade_b-propeller_TolB-like Gene3D Six-bladed beta-propeller, TolB-like
HYR_dom ProSiteProfiles HYR domain
HYR_dom Pfam HYR domain
SGL Pfam SMP-30/Gluconolactonase/LRE-like region
Kringle_sf Gene3D Kringle superfamily
Kringle_CS ProSitePatterns Kringle, conserved site
Kringle CDD Kringle
Kringle Pfam Kringle
Kringle-like SUPERFAMILY Kringle-like fold
Kringle ProSiteProfiles Kringle
Kringle SMART Kringle

GOSlim

33 results

GO Term Annotation Origin Type
receptor binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
mitochondrion Blast cellular component
early endosome Blast cellular component
endoplasmic reticulum Blast cellular component
Golgi apparatus Blast cellular component
plasma membrane Blast cellular component
cell surface Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
cytoplasmic vesicle Blast cellular component
identical protein binding Blast molecular function
protein homodimerization activity Blast molecular function
neuronal cell body Blast cellular component
membrane raft Blast cellular component
synapse Blast cellular component
membrane organization Blast biological process
organelle organization Blast biological process
macromolecular complex binding Blast molecular function
plasma membrane region Blast cellular component
kinase activity Blast molecular function
enzyme regulator activity Blast molecular function
transmembrane transport Blast biological process
whole membrane Blast cellular component
intracellular organelle part Blast cellular component
bounding membrane of organelle Blast cellular component
cell surface receptor signaling pathway Blast biological process
cell-cell signaling Blast biological process
transmembrane signaling receptor activity Blast molecular function
macromolecular complex Blast cellular component
signaling receptor activity Blast molecular function
plasma membrane part Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

31 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
low-density lipoprotein receptor activity Hs molecular function 107 2.09e-23
receptor binding Hs molecular function 107 2.09e-23
frizzled binding Hs molecular function 107 2.09e-23
protein binding Hs molecular function 107 2.09e-23
extracellular region Hs cellular component 107 2.09e-23
mitochondrion Hs cellular component 101 1.08e-21
early endosome Hs cellular component 107 2.09e-23
endoplasmic reticulum Hs cellular component 107 2.09e-23
Golgi apparatus Hs cellular component 107 2.09e-23
plasma membrane Hs cellular component 107 2.09e-23
caveola Hs cellular component 107 2.09e-23
cell surface Hs cellular component 107 2.09e-23
membrane Hs cellular component 107 2.09e-23
integral component of membrane Hs cellular component 107 2.09e-23
Wnt-protein binding Hs molecular function 107 2.09e-23
kinase inhibitor activity Hs molecular function 107 2.09e-23
toxin transporter activity Hs molecular function 107 2.09e-23
cytoplasmic vesicle Hs cellular component 107 2.09e-23
early endosome membrane Hs cellular component 107 2.09e-23
apolipoprotein binding Hs molecular function 107 2.09e-23
identical protein binding Hs molecular function 107 2.09e-23
protein homodimerization activity Hs molecular function 107 2.09e-23
Wnt-activated receptor activity Hs molecular function 107 2.09e-23
neuronal cell body Hs cellular component 107 2.09e-23
receptor complex Hs cellular component 107 2.09e-23
membrane raft Hs cellular component 107 2.09e-23
synapse Hs cellular component 107 2.09e-23
coreceptor activity involved in Wnt signaling pathway Hs molecular function 107 2.09e-23
coreceptor activity involved in canonical Wnt signaling pathway Hs molecular function 107 2.09e-23
Wnt-Frizzled-LRP5/6 complex Hs cellular component 107 2.09e-23
Wnt signalosome Hs cellular component 107 2.09e-23

GO (InterProScan)

No result

GO Term Analysis Type e-value

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