Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

CALM2; TNNC1; TNNC2

Species

P.mammillata

Unique Gene ID

Phmamm.g00005543

Gene Model ID

Phmamm.CG.MTP2014.S216.g05543

Location

S216:78840..80976

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S216.g05543.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
EF_hand_dom ProSiteProfiles EF-hand domain
EF_hand_dom CDD EF-hand domain
EF-hand-dom_pair SUPERFAMILY EF-hand domain pair
EF_Hand_1_Ca_BS ProSitePatterns EF-Hand 1, calcium-binding site
EF_hand_dom SMART EF-hand domain
EF_hand_dom Pfam EF-hand domain

GOSlim

62 results

GO Term Annotation Origin Type
actin binding Blast molecular function
calcium ion binding Orthology molecular function
protein binding Orthology molecular function
nucleus Blast cellular component
cytoplasm Orthology cellular component
centrosome Blast cellular component
cytosol Orthology cellular component
cytoskeleton Orthology cellular component
plasma membrane Orthology cellular component
kinase activity Blast molecular function
protein kinase binding Blast molecular function
vesicle Blast cellular component
macromolecular complex Blast cellular component
protein homodimerization activity Blast molecular function
metal ion binding Orthology molecular function
actin filament binding Blast molecular function
extracellular exosome Blast cellular component
Golgi membrane Orthology cellular component
extracellular region Orthology cellular component
extracellular space Orthology cellular component
Golgi apparatus Orthology cellular component
signal transduction Orthology biological process
visual perception Orthology biological process
membrane Orthology cellular component
cell junction Orthology cellular component
synapse Orthology cellular component
postsynaptic membrane Orthology cellular component
perinuclear region of cytoplasm Orthology cellular component
regulation of molecular function Orthology biological process
enzyme regulator activity Orthology molecular function
molecular function regulator Orthology molecular function
transmembrane transport Orthology biological process
cell periphery Orthology cellular component
cytoplasmic part Orthology cellular component
binding Orthology molecular function
cell morphogenesis involved in neuron differentiation Orthology biological process
organelle Orthology cellular component
postsynapse Orthology cellular component
neuron part Orthology cellular component
intracellular protein transport Orthology biological process
establishment of protein localization to organelle Orthology biological process
regulation of catalytic activity Orthology biological process
cell projection part Orthology cellular component
axon Orthology cellular component
synapse part Orthology cellular component
neuron development Orthology biological process
anatomical structure morphogenesis Orthology biological process
animal organ development Orthology biological process
cytoskeletal part Blast cellular component
microtubule cytoskeleton Blast cellular component
microtubule Blast cellular component
enzyme binding Blast molecular function
metal ion transport Blast biological process
organelle part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
cytoskeletal protein binding Blast molecular function
protein N-terminus binding Blast molecular function
integral component of membrane Blast cellular component
enzyme activator activity Blast molecular function
protein serine/threonine kinase activity Blast molecular function
protein dephosphorylation Blast biological process
regulation of cellular metabolic process Blast biological process

GO (Orthology)

32 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
calcium ion binding Hs molecular function
protein binding Hs molecular function
cytoplasm Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
plasma membrane Hs cellular component
ion channel binding Hs molecular function
metal ion binding Hs molecular function
calcium-dependent protein binding Hs molecular function
Golgi membrane Hs cellular component
enzyme inhibitor activity Hs molecular function
calcium channel regulator activity Hs molecular function
extracellular region Hs cellular component
extracellular space Hs cellular component
Golgi apparatus Hs cellular component
cell cortex Hs cellular component
signal transduction Hs biological process
visual perception Hs biological process
phototransduction Hs biological process
nuclear localization sequence binding Hs molecular function
photoreceptor cell morphogenesis Hs biological process
postsynaptic density Hs cellular component
membrane Hs cellular component
cell junction Hs cellular component
negative regulation of protein import into nucleus Hs biological process
negative regulation of catalytic activity Hs biological process
terminal bouton Hs cellular component
synapse Hs cellular component
postsynaptic membrane Hs cellular component
retinal cone cell development Hs biological process
perinuclear region of cytoplasm Hs cellular component
regulation of molecular function Hs biological process

GO (Blast)

38 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
spindle pole Hs cellular component 96.3 2.04e-25
actin binding Hs molecular function 100 1.99e-27
calcium ion binding Hs molecular function 117 3.54e-34
protein binding Hs molecular function 117 3.54e-34
nucleus Hs cellular component 96.3 2.04e-25
cytoplasm Hs cellular component 96.3 2.04e-25
centrosome Hs cellular component 96.3 2.04e-25
spindle Hs cellular component 96.3 2.04e-25
cytosol Hs cellular component 117 3.54e-34
cytoskeleton Hs cellular component 96.3 2.04e-25
troponin complex Hs cellular component 117 3.54e-34
spindle microtubule Hs cellular component 96.3 2.04e-25
plasma membrane Hs cellular component 96.3 2.04e-25
adenylate cyclase binding Hs molecular function 96.3 2.04e-25
kinase activity Hs molecular function 96.3 2.04e-25
calcium channel inhibitor activity Hs molecular function 96.3 2.04e-25
protein kinase binding Hs molecular function 96.3 2.04e-25
protein domain specific binding Hs molecular function 96.3 2.04e-25
sarcomere Hs cellular component 96.3 2.04e-25
troponin I binding Hs molecular function 117 3.54e-34
troponin T binding Hs molecular function 117 3.54e-34
titin binding Hs molecular function 96.3 2.04e-25
vesicle Hs cellular component 96.3 2.04e-25
N-terminal myristoylation domain binding Hs molecular function 96.3 2.04e-25
macromolecular complex Hs cellular component 96.3 2.04e-25
calcium channel complex Hs cellular component 96.3 2.04e-25
protein homodimerization activity Hs molecular function 117 3.54e-34
contractile fiber Hs cellular component 117 3.54e-34
protein serine/threonine kinase activator activity Hs molecular function 96.3 2.04e-25
ion channel binding Hs molecular function 96.3 2.04e-25
metal ion binding Hs molecular function 117 3.54e-34
calcium-dependent protein binding Hs molecular function 117 3.54e-34
actin filament binding Hs molecular function 117 3.54e-34
extracellular exosome Hs cellular component 96.3 2.04e-25
protein phosphatase activator activity Hs molecular function 96.3 2.04e-25
disordered domain specific binding Hs molecular function 96.3 2.04e-25
catalytic complex Hs cellular component 96.3 2.04e-25
cardiac Troponin complex Hs cellular component 117 3.54e-34

GO (InterProScan)

1 result

GO Term Analysis Type e-value
calcium ion binding CDD molecular function 3.34549E-15