Aniseed - Gene card

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

5 results

AHC0AAA244YH10

Plate: Plate_244_H10

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
Rhodanese-like_dom_sf	Gene3D	Rhodanese-like domain superfamily
USP_CS	ProSitePatterns	Ubiquitin specific protease, conserved site
Rhodanese-like_dom	ProSiteProfiles	Rhodanese-like domain
USP8_dimer	Pfam	USP8 dimerisation domain
Peptidase_C19_UCH	Pfam	Peptidase C19, ubiquitin carboxyl-terminal hydrolase
Rhodanese-like_dom_sf	SUPERFAMILY	Rhodanese-like domain superfamily
USP_dom	ProSiteProfiles	Ubiquitin specific protease domain

GOSlim

40 results

GO Term	Annotation Origin	Type
catalytic activity	Blast	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Blast	cellular component
cytoplasm	Orthology	cellular component
mitochondrion	Blast	cellular component
endosome	Orthology	cellular component
early endosome	Orthology	cellular component
centrosome	Blast	cellular component
cytosol	Orthology	cellular component
plasma membrane	Orthology	cellular component
proteolysis	Orthology	biological process
cell cycle	Orthology	biological process
peptidase activity	Orthology	molecular function
cell proliferation	Orthology	biological process
membrane	Orthology	cellular component
hydrolase activity	Orthology	molecular function
midbody	Orthology	cellular component
ubiquitin protein ligase binding	Blast	molecular function
identical protein binding	Blast	molecular function
metal ion binding	Blast	molecular function
perinuclear region of cytoplasm	Blast	cellular component
positive regulation of canonical Wnt signaling pathway	Orthology	biological process
membrane organization	Orthology	biological process
cell division	Orthology	biological process
endopeptidase activity	Orthology	molecular function
peptidase activity, acting on L-amino acid peptides	Orthology	molecular function
organelle organization	Orthology	biological process
intracellular organelle part	Orthology	cellular component
whole membrane	Orthology	cellular component
bounding membrane of organelle	Orthology	cellular component
organelle	Orthology	cellular component
postsynapse	Orthology	cellular component
neuron part	Orthology	cellular component
plasma membrane part	Orthology	cellular component
membrane part	Orthology	cellular component
cell adhesion molecule binding	Orthology	molecular function
receptor binding	Blast	molecular function
cell periphery	Blast	cellular component
cytoplasmic part	Blast	cellular component

GO (Orthology)

32 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
mitotic cytokinesis	Hs	biological process
cysteine-type endopeptidase activity	Hs	molecular function
thiol-dependent ubiquitin-specific protease activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
endosome	Hs	cellular component
early endosome	Hs	cellular component
cytosol	Hs	cellular component
plasma membrane	Hs	cellular component
proteolysis	Hs	biological process
ubiquitin-dependent protein catabolic process	Hs	biological process
endosome organization	Hs	biological process
cell cycle	Hs	biological process
peptidase activity	Hs	molecular function
cysteine-type peptidase activity	Hs	molecular function
cell proliferation	Hs	biological process
endosome membrane	Hs	cellular component
postsynaptic density	Hs	cellular component
membrane	Hs	cellular component
protein deubiquitination	Hs	biological process
hydrolase activity	Hs	molecular function
SH3 domain binding	Hs	molecular function
extrinsic component of plasma membrane	Hs	cellular component
midbody	Hs	cellular component
extrinsic component of endosome membrane	Hs	cellular component
thiol-dependent ubiquitinyl hydrolase activity	Hs	molecular function
dendritic spine	Hs	cellular component
cadherin binding	Hs	molecular function
protein K63-linked deubiquitination	Hs	biological process
protein K48-linked deubiquitination	Hs	biological process
positive regulation of canonical Wnt signaling pathway	Hs	biological process

GO (Blast)

35 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
catalytic activity	Hs	molecular function	193	2.15e-50
cysteine-type endopeptidase activity	Hs	molecular function	383	9.46e-115
thiol-dependent ubiquitin-specific protease activity	Hs	molecular function	383	9.46e-115
transforming growth factor beta receptor binding	Hs	molecular function	193	2.15e-50
protein binding	Hs	molecular function	383	9.46e-115
nucleus	Hs	cellular component	383	9.46e-115
nucleoplasm	Hs	cellular component	207	7.61e-57
cytoplasm	Hs	cellular component	383	9.46e-115
mitochondrion	Hs	cellular component	193	2.15e-50
endosome	Hs	cellular component	383	9.46e-115
early endosome	Hs	cellular component	383	9.46e-115
centrosome	Hs	cellular component	207	7.61e-57
cytosol	Hs	cellular component	383	9.46e-115
plasma membrane	Hs	cellular component	383	9.46e-115
cell cortex	Hs	cellular component	207	7.61e-57
peptidase activity	Hs	molecular function	383	9.46e-115
cysteine-type peptidase activity	Hs	molecular function	383	9.46e-115
endosome membrane	Hs	cellular component	383	9.46e-115
postsynaptic density	Hs	cellular component	383	9.46e-115
membrane	Hs	cellular component	383	9.46e-115
hydrolase activity	Hs	molecular function	383	9.46e-115
SH3 domain binding	Hs	molecular function	383	9.46e-115
extrinsic component of plasma membrane	Hs	cellular component	383	9.46e-115
cyclin binding	Hs	molecular function	207	7.61e-57
midbody	Hs	cellular component	383	9.46e-115
extrinsic component of endosome membrane	Hs	cellular component	383	9.46e-115
ubiquitin protein ligase binding	Hs	molecular function	207	7.61e-57
thiol-dependent ubiquitinyl hydrolase activity	Hs	molecular function	383	9.46e-115
identical protein binding	Hs	molecular function	207	7.61e-57
dendritic spine	Hs	cellular component	383	9.46e-115
cadherin binding	Hs	molecular function	383	9.46e-115
SMAD binding	Hs	molecular function	193	2.15e-50
metal ion binding	Hs	molecular function	207	7.61e-57
perinuclear region of cytoplasm	Hs	cellular component	207	7.61e-57
ubiquitin modification-dependent histone binding	Hs	molecular function	193	2.15e-50

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
ubiquitin-dependent protein catabolic process	ProSitePatterns	biological process
protein deubiquitination	Pfam	biological process	4.1E-67
thiol-dependent ubiquitinyl hydrolase activity	Pfam	molecular function	4.1E-67

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences

External database links

Genoscope Yasuo Villefranche

AHC0AAA66YA17

AHC0AAA116YI10

AHC0AAA211YD20