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GENE CARD

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Gene Card

Best human hits

SEMA6A; SEMA6C; SEMA6D

Species

P.mammillata

Unique Gene ID

Phmamm.g00005656

Gene Model ID

Phmamm.CG.MTP2014.S223.g05656

Location

S223:103832..115211

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

14 results

AHC0AAA22YL18

Plate: Plate_22_L18

AHC0AAA8YP18

Plate: Plate_8_P18

AHC0AAA54YI17

Plate: Plate_54_I17

AHC0AAA61YD15

Plate: Plate_61_D15

AHC0AAA80YI05

Plate: Plate_80_I05

AHC0AAA127YF14

Plate: Plate_127_F14

AHC0AAA138YK12

Plate: Plate_138_K12

AHC0AAA146YI14

Plate: Plate_146_I14

AHC0AAA166YH16

Plate: Plate_166_H16

AHC0AAA180YI08

Plate: Plate_180_I08

AHC0AAA188YP08

Plate: Plate_188_P08

AHC0AAA220YO14

Plate: Plate_220_O14

AHC0AAA239YF19

Plate: Plate_239_F19

AHC0AAA54YK19

Plate: Plate_54_K19

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
WD40/YVTN_repeat-like_dom_sf Gene3D WD40/YVTN repeat-like-containing domain superfamily
Semap_dom ProSiteProfiles Sema domain
Semap_dom_sf SUPERFAMILY Sema domain superfamily
Semap_dom Pfam Sema domain
Semap_dom SMART Sema domain
Semaphorin PANTHER Semaphorin

GOSlim

10 results

GO Term Annotation Origin Type
transmembrane signaling receptor activity Blast molecular function
protein binding Blast molecular function
cytoplasm Blast cellular component
Golgi apparatus Blast cellular component
plasma membrane Blast cellular component
integral component of plasma membrane Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
axon Blast cellular component
receptor binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
transmembrane signaling receptor activity Hs molecular function 242 6.50e-66
protein binding Hs molecular function 243 6.16e-66
cytoplasm Hs cellular component 243 6.16e-66
Golgi apparatus Hs cellular component 243 6.16e-66
plasma membrane Hs cellular component 243 6.16e-66
integral component of plasma membrane Hs cellular component 243 6.16e-66
membrane Hs cellular component 243 6.16e-66
integral component of membrane Hs cellular component 243 6.16e-66
semaphorin receptor binding Hs molecular function 243 6.16e-66
axon Hs cellular component 242 6.50e-66

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Gene3D molecular function 6.2E-104