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Gene Card

Best human hits

ZFP36; ZFP36L1; ZFP36L2

Species

P.mammillata

Unique Gene ID

Phmamm.g00005660

Gene Model ID

Phmamm.CG.MTP2014.S224.g05660

Location

S224:41339..43066

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S224.g05660.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

5 results

AHC0AAA67YA23

Plate: Plate_67_A23

AHC0AAA113YP17

Plate: Plate_113_P17

AHC0AAA124YF24

Plate: Plate_124_F24

AHC0AAA84YO15

Plate: Plate_84_O15

AHC0AAA192YN04

Plate: Plate_192_N04

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Znf_CCCH ProSiteProfiles Zinc finger, CCCH-type
Znf_CCCH Pfam Zinc finger, CCCH-type
Znf_CCCH_sf SUPERFAMILY Zinc finger, CCCH-type superfamily
Znf_CCCH SMART Zinc finger, CCCH-type

GOSlim

14 results

GO Term Annotation Origin Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding Blast molecular function
DNA binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Blast molecular function
RNA binding Blast molecular function
protein binding Blast molecular function
nucleus Blast cellular component
cytoplasm Blast cellular component
cytosol Blast cellular component
metal ion binding Blast molecular function
cytoplasmic part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
macromolecular complex Blast cellular component
intracellular part Blast cellular component
enzyme binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
P-body Hs cellular component 152 5.44e-43
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 152 5.44e-43
DNA binding Hs molecular function 152 5.44e-43
transcription factor activity, sequence-specific DNA binding Hs molecular function 152 5.44e-43
RNA binding Hs molecular function 152 5.44e-43
mRNA binding Hs molecular function 152 5.44e-43
protein binding Hs molecular function 152 5.44e-43
nucleus Hs cellular component 152 5.44e-43
cytoplasm Hs cellular component 152 5.44e-43
cytosol Hs cellular component 152 5.44e-43
AU-rich element binding Hs molecular function 152 5.44e-43
CCR4-NOT complex Hs cellular component 111 9.78e-28
intracellular ribonucleoprotein complex Hs cellular component 152 5.44e-43
mRNA 3'-UTR AU-rich region binding Hs molecular function 152 5.44e-43
metal ion binding Hs molecular function 152 5.44e-43
RNA polymerase binding Hs molecular function 111 9.78e-28
14-3-3 protein binding Hs molecular function 152 5.44e-43
ribonucleoprotein complex Hs cellular component 111 9.78e-28

GO (InterProScan)

1 result

GO Term Analysis Type e-value
metal ion binding Pfam molecular function 7.7E-11

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