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Gene Card

Best human hits

ACSL1; ACSL5; ACSL6

Species

P.mammillata

Unique Gene ID

Phmamm.g00005744

Gene Model ID

Phmamm.CG.MTP2014.S229.g05744

Location

S229:13581..21904

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S229.g05744.01.t
Phmamm.CG.MTP2014.S229.g05744.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

21 results

AHC0AAA8YJ21

Plate: Plate_8_J21

AHC0AAA73YJ20

Plate: Plate_73_J20

AHC0AAA75YF07

Plate: Plate_75_F07

AHC0AAA80YE21

Plate: Plate_80_E21

AHC0AAA102YF03

Plate: Plate_102_F03

AHC0AAA134YH10

Plate: Plate_134_H10

AHC0AAA152YF24

Plate: Plate_152_F24

AHC0AAA156YO23

Plate: Plate_156_O23

AHC0AAA85YN03

Plate: Plate_85_N03

AHC0AAA158YD19

Plate: Plate_158_D19

AHC0AAA201YG21

Plate: Plate_201_G21

AHC0AAA201YN24

Plate: Plate_201_N24

AHC0AAA202YG24

Plate: Plate_202_G24

AHC0AAA214YF24

Plate: Plate_214_F24

AHC0AAA225YK24

Plate: Plate_225_K24

AHC0AAA232YH22

Plate: Plate_232_H22

AHC0AAA243YF05

Plate: Plate_243_F05

AHC0AAA256YP01

Plate: Plate_256_P01

AHC0AAA262YE19

Plate: Plate_262_E19

AHC0AAA263YK06

Plate: Plate_263_K06

AHC0AAA268YF12

Plate: Plate_268_F12

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
AMP-dep_Synth/Lig Pfam AMP-dependent synthetase/ligase
AMP-binding_CS ProSitePatterns AMP-binding, conserved site

GOSlim

33 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
catalytic activity Orthology molecular function
ATP binding Orthology molecular function
nucleus Orthology cellular component
nucleolus Orthology cellular component
mitochondrion Orthology cellular component
mitochondrial inner membrane Orthology cellular component
peroxisome Orthology cellular component
endoplasmic reticulum Orthology cellular component
endoplasmic reticulum membrane Orthology cellular component
plasma membrane Orthology cellular component
metabolic process Orthology biological process
response to organic substance Orthology biological process
membrane Orthology cellular component
integral component of membrane Orthology cellular component
ligase activity Orthology molecular function
organelle membrane Orthology cellular component
protein homodimerization activity Orthology molecular function
intracellular membrane-bounded organelle Orthology cellular component
cellular metabolic process Orthology biological process
organic substance metabolic process Orthology biological process
whole membrane Orthology cellular component
mitochondrial membrane Orthology cellular component
bounding membrane of organelle Orthology cellular component
intracellular organelle part Orthology cellular component
phosphate-containing compound metabolic process Orthology biological process
nucleobase-containing compound metabolic process Orthology biological process
organic substance transport Orthology biological process
ion transport Orthology biological process
cytokine-mediated signaling pathway Orthology biological process
amide biosynthetic process Orthology biological process
positive regulation of catalytic activity Orthology biological process
protein serine/threonine kinase activity Orthology molecular function

GO (Orthology)

38 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
nucleotide binding Hs molecular function
long-chain fatty acid metabolic process Hs biological process
catalytic activity Hs molecular function
long-chain fatty acid-CoA ligase activity Hs molecular function
ATP binding Hs molecular function
nucleus Hs cellular component
nucleolus Hs cellular component
mitochondrion Hs cellular component
mitochondrial outer membrane Hs cellular component
mitochondrial inner membrane Hs cellular component
peroxisome Hs cellular component
peroxisomal membrane Hs cellular component
endoplasmic reticulum Hs cellular component
endoplasmic reticulum membrane Hs cellular component
plasma membrane Hs cellular component
lipid metabolic process Hs biological process
fatty acid metabolic process Hs biological process
acyl-CoA metabolic process Hs biological process
triglyceride metabolic process Hs biological process
response to nutrient Hs biological process
metabolic process Hs biological process
lipid biosynthetic process Hs biological process
response to organic substance Hs biological process
response to organic cyclic compound Hs biological process
fatty acid transport Hs biological process
membrane Hs cellular component
integral component of membrane Hs cellular component
ligase activity Hs molecular function
regulation of lipid metabolic process Hs biological process
organelle membrane Hs cellular component
adiponectin-activated signaling pathway Hs biological process
long-chain fatty-acyl-CoA biosynthetic process Hs biological process
response to drug Hs biological process
protein homodimerization activity Hs molecular function
intracellular membrane-bounded organelle Hs cellular component
long-chain fatty acid import Hs biological process
positive regulation of protein serine/threonine kinase activity Hs biological process
decanoate--CoA ligase activity Hs molecular function

GO (Blast)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 482 1.27e-160
catalytic activity Hs molecular function 482 1.27e-160
long-chain fatty acid-CoA ligase activity Hs molecular function 482 1.27e-160
ATP binding Hs molecular function 482 1.27e-160
nucleus Hs cellular component 476 4.50e-158
nucleolus Hs cellular component 476 4.50e-158
mitochondrion Hs cellular component 482 1.27e-160
mitochondrial outer membrane Hs cellular component 482 1.27e-160
mitochondrial inner membrane Hs cellular component 476 4.50e-158
peroxisome Hs cellular component 482 1.27e-160
peroxisomal membrane Hs cellular component 482 1.27e-160
endoplasmic reticulum Hs cellular component 482 1.27e-160
endoplasmic reticulum membrane Hs cellular component 482 1.27e-160
plasma membrane Hs cellular component 482 1.27e-160
membrane Hs cellular component 482 1.27e-160
integral component of membrane Hs cellular component 482 1.27e-160
ligase activity Hs molecular function 482 1.27e-160
organelle membrane Hs cellular component 482 1.27e-160
protein homodimerization activity Hs molecular function 482 1.27e-160
intracellular membrane-bounded organelle Hs cellular component 482 1.27e-160
decanoate--CoA ligase activity Hs molecular function 482 1.27e-160

GO (InterProScan)

2 results

GO Term Analysis Type e-value
catalytic activity Pfam molecular function 3.7E-95
metabolic process Pfam biological process 3.7E-95

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