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GENE CARD

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Gene Card

Best human hits

EIF3E

Species

P.mammillata

Unique Gene ID

Phmamm.g00005776

Gene Model ID

Phmamm.CG.MTP2014.S231.g05776

Location

S231:42046..47879

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S231.g05776.01.t
Phmamm.CG.MTP2014.S231.g05776.02.t
Phmamm.CG.MTP2014.S231.g05776.03.t
Phmamm.CG.MTP2014.S231.g05776.04.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

13 results

AHC0AAA36YC13

Plate: Plate_36_C13

AHC0AAA61YO12

Plate: Plate_61_O12

AHC0AAA74YM18

Plate: Plate_74_M18

AHC0AAA76YF04

Plate: Plate_76_F04

AHC0AAA144YF21

Plate: Plate_144_F21

AHC0AAA156YH17

Plate: Plate_156_H17

AHC0AAA91YI01

Plate: Plate_91_I01

AHC0AAA95YG15

Plate: Plate_95_G15

AHC0AAA163YH17

Plate: Plate_163_H17

AHC0AAA211YH05

Plate: Plate_211_H05

AHC0AAA231YI17

Plate: Plate_231_I17

AHC0AAA235YG02

Plate: Plate_235_G02

AHC0AAA268YF19

Plate: Plate_268_F19

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
eIF3e_N SMART Eukaryotic translation initiation factor 3 subunit E, N-terminal
eIF3e PANTHER Eukaryotic translation initiation factor 3 subunit E
eIF3e_N Pfam Eukaryotic translation initiation factor 3 subunit E, N-terminal
WH-like_DNA-bd_sf Gene3D Winged helix-like DNA-binding domain superfamily
PCI_dom Pfam Proteasome component (PCI) domain
PCI_dom SMART Proteasome component (PCI) domain
PCI_dom ProSiteProfiles Proteasome component (PCI) domain
WH_DNA-bd_sf SUPERFAMILY Winged helix DNA-binding domain superfamily
eIF3e PIRSF Eukaryotic translation initiation factor 3 subunit E
eIF3e Hamap Eukaryotic translation initiation factor 3 subunit E

GOSlim

21 results

GO Term Annotation Origin Type
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay Orthology biological process
RNA binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
translational initiation Orthology biological process
membrane Orthology cellular component
nuclear body Orthology cellular component
protein N-terminus binding Orthology molecular function
extracellular exosome Orthology cellular component
intracellular organelle part Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
regulation of gene expression Orthology biological process
cytoplasmic part Orthology cellular component
macromolecular complex Orthology cellular component
ribosome Orthology cellular component
cell adhesion molecule binding Orthology molecular function
positive regulation of gene expression Orthology biological process
negative regulation of gene expression Orthology biological process

GO (Orthology)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay Hs biological process
chromatin Hs cellular component
formation of cytoplasmic translation initiation complex Hs biological process
cytoplasmic translational initiation Hs biological process
RNA binding Hs molecular function
translation initiation factor activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
eukaryotic translation initiation factor 3 complex Hs cellular component
translation Hs biological process
translational initiation Hs biological process
regulation of translational initiation Hs biological process
membrane Hs cellular component
eukaryotic 43S preinitiation complex Hs cellular component
nuclear body Hs cellular component
PML body Hs cellular component
eukaryotic 48S preinitiation complex Hs cellular component
cadherin binding Hs molecular function
positive regulation of translation Hs biological process
negative regulation of translational initiation Hs biological process
protein N-terminus binding Hs molecular function
extracellular exosome Hs cellular component
eukaryotic translation initiation factor 3 complex, eIF3e Hs cellular component

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
chromatin Hs cellular component 667 0.0
RNA binding Hs molecular function 667 0.0
translation initiation factor activity Hs molecular function 667 0.0
protein binding Hs molecular function 667 0.0
nucleus Hs cellular component 667 0.0
nucleoplasm Hs cellular component 667 0.0
cytoplasm Hs cellular component 667 0.0
cytosol Hs cellular component 667 0.0
eukaryotic translation initiation factor 3 complex Hs cellular component 667 0.0
membrane Hs cellular component 667 0.0
eukaryotic 43S preinitiation complex Hs cellular component 667 0.0
nuclear body Hs cellular component 667 0.0
PML body Hs cellular component 667 0.0
eukaryotic 48S preinitiation complex Hs cellular component 667 0.0
cadherin binding Hs molecular function 667 0.0
protein N-terminus binding Hs molecular function 667 0.0
extracellular exosome Hs cellular component 667 0.0
eukaryotic translation initiation factor 3 complex, eIF3e Hs cellular component 667 0.0

GO (InterProScan)

4 results

GO Term Analysis Type e-value
translation initiation factor activity PANTHER molecular function 2.3E-225
protein binding Pfam molecular function 2.7E-18
cytoplasm PANTHER cellular component 2.3E-225
eukaryotic translation initiation factor 3 complex PANTHER cellular component 2.3E-225

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