Aniseed - Gene card

Gene Card

Best human hits

AC092647.5; MRPS17

Species

P.mammillata

Unique Gene ID

Phmamm.g00005785

Gene Model ID

Phmamm.CG.MTP2014.S231.g05785

Location

S231:121312..122006

Transcript Models and Sequences

Phmamm.CG.MTP2014.S231.g05785.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

5 results

AHC0AAA98YD02

Plate: Plate_98_D02

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term	Analysis	Definition
NA-bd_OB-fold	SUPERFAMILY	Nucleic acid-binding, OB-fold

GOSlim

9 results

GO Term	Annotation Origin	Type
nucleic acid binding	Orthology	molecular function
RNA binding	Orthology	molecular function
structural constituent of ribosome	Orthology	molecular function
intracellular	Orthology	cellular component
mitochondrion	Orthology	cellular component
mitochondrial inner membrane	Orthology	cellular component
ribosome	Orthology	cellular component
regulation of transcription, DNA-templated	Orthology	biological process
mitochondrial matrix	Orthology	cellular component

GO (Orthology)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleic acid binding	Hs	molecular function
RNA binding	Hs	molecular function
structural constituent of ribosome	Hs	molecular function
intracellular	Hs	cellular component
mitochondrion	Hs	cellular component
mitochondrial inner membrane	Hs	cellular component
mitochondrial small ribosomal subunit	Hs	cellular component
ribosome	Hs	cellular component
regulation of transcription, DNA-templated	Hs	biological process
translation	Hs	biological process
rRNA binding	Hs	molecular function
intracellular ribonucleoprotein complex	Hs	cellular component
mitochondrial translation	Hs	biological process
mitochondrial translational elongation	Hs	biological process
mitochondrial translational termination	Hs	biological process

GO (Blast)

10 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleic acid binding	Hs	molecular function	58.2	7.06e-11
RNA binding	Hs	molecular function	58.2	1.41e-11
structural constituent of ribosome	Hs	molecular function	58.2	1.41e-11
intracellular	Hs	cellular component	58.2	1.41e-11
mitochondrion	Hs	cellular component	58.2	1.41e-11
mitochondrial inner membrane	Hs	cellular component	58.2	1.41e-11
mitochondrial small ribosomal subunit	Hs	cellular component	58.2	1.41e-11
ribosome	Hs	cellular component	58.2	1.41e-11
rRNA binding	Hs	molecular function	58.2	1.41e-11
intracellular ribonucleoprotein complex	Hs	cellular component	58.2	1.41e-11

GO (InterProScan)