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Gene Card

Best human hits

CD22; CEACAM5; HSPG2

Species

P.mammillata

Unique Gene ID

Phmamm.g00016649

Gene Model ID

Phmamm.CG.MTP2014.S2418.g16649

Location

S2418:15443..19040

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S2418.g16649.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

1 result

AHC0AAA253YE09

Plate: Plate_253_E09

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Ig_sub SMART Immunoglobulin subtype
Ig-like_dom ProSiteProfiles Immunoglobulin-like domain
Ig-like_fold Gene3D Immunoglobulin-like fold
Ig-like_dom_sf SUPERFAMILY Immunoglobulin-like domain superfamily

GOSlim

28 results

GO Term Annotation Origin Type
calcium ion binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
plasma membrane Blast cellular component
integral component of plasma membrane Blast cellular component
focal adhesion Blast cellular component
protein C-terminus binding Blast molecular function
membrane Blast cellular component
integral component of membrane Blast cellular component
basolateral plasma membrane Blast cellular component
identical protein binding Blast molecular function
protein homodimerization activity Blast molecular function
metal ion binding Blast molecular function
extracellular exosome Blast cellular component
extracellular region part Blast cellular component
Golgi apparatus part Blast cellular component
intracellular organelle lumen Blast cellular component
binding Blast molecular function
intrinsic component of membrane Blast cellular component
anion binding Blast molecular function
carbohydrate derivative binding Blast molecular function
lysosome Blast cellular component
vacuolar part Blast cellular component
receptor binding Blast molecular function
cell surface Blast cellular component
plasma membrane part Blast cellular component
macromolecular complex Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
calcium ion binding Hs molecular function 39.7 0.002
protein binding Hs molecular function 39.7 0.002
extracellular region Hs cellular component 39.7 0.002
proteinaceous extracellular matrix Hs cellular component 39.7 0.002
basement membrane Hs cellular component 39.7 0.002
extracellular space Hs cellular component 39.7 0.002
Golgi lumen Hs cellular component 39.7 0.002
plasma membrane Hs cellular component 39.7 0.002
integral component of plasma membrane Hs cellular component 39.7 0.002
focal adhesion Hs cellular component 39.7 0.002
protein C-terminus binding Hs molecular function 39.7 0.002
membrane Hs cellular component 39.7 0.002
integral component of membrane Hs cellular component 39.3 0.003
basolateral plasma membrane Hs cellular component 39.7 0.002
carbohydrate binding Hs molecular function 39.3 0.003
extracellular matrix Hs cellular component 39.7 0.002
anchored component of membrane Hs cellular component 39.7 0.002
GPI anchor binding Hs molecular function 39.7 0.002
identical protein binding Hs molecular function 39.7 0.002
protein homodimerization activity Hs molecular function 39.7 0.002
lysosomal lumen Hs cellular component 39.7 0.002
metal ion binding Hs molecular function 39.7 0.002
low-density lipoprotein particle receptor binding Hs molecular function 39.7 0.002
extracellular exosome Hs cellular component 39.7 0.002
integral component of external side of plasma membrane Hs cellular component 39.7 0.002
plasma membrane protein complex Hs cellular component 39.7 0.002

GO (InterProScan)

No result

GO Term Analysis Type e-value

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