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GENE CARD

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Gene Card

Best human hits

GP2; TECTA; UMOD

Species

P.mammillata

Unique Gene ID

Phmamm.g00001031

Gene Model ID

Phmamm.CG.MTP2014.S26.g01031

Location

S26:5146..8162

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S26.g01031.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

12 results

AHC0AAA16YJ16

Plate: Plate_16_J16

AHC0AAA48YE04

Plate: Plate_48_E04

AHC0AAA54YB20

Plate: Plate_54_B20

AHC0AAA110YC21

Plate: Plate_110_C21

AHC0AAA112YA18

Plate: Plate_112_A18

AHC0AAA120YI09

Plate: Plate_120_I09

AHC0AAA150YE20

Plate: Plate_150_E20

AHC0AAA88YA09

Plate: Plate_88_A09

AHC0AAA89YH18

Plate: Plate_89_H18

AHC0AAA161YI15

Plate: Plate_161_I15

AHC0AAA252YD20

Plate: Plate_252_D20

AHC0AAA54YB18

Plate: Plate_54_B18

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
ZP_dom ProSiteProfiles Zona pellucida domain
ZP_dom Pfam Zona pellucida domain
ZP_dom SMART Zona pellucida domain

GOSlim

24 results

GO Term Annotation Origin Type
calcium ion binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
plasma membrane Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
basolateral plasma membrane Blast cellular component
apical plasma membrane Blast cellular component
cell projection Blast cellular component
extracellular exosome Blast cellular component
cytoskeletal part Blast cellular component
microtubule cytoskeleton Blast cellular component
extracellular region part Blast cellular component
structural molecule activity Blast molecular function
Golgi apparatus part Blast cellular component
intracellular organelle lumen Blast cellular component
organelle Blast cellular component
plasma membrane region Blast cellular component
macromolecular complex Blast cellular component
macromolecular complex binding Blast molecular function
membrane part Blast cellular component
intrinsic component of membrane Blast cellular component
cell projection membrane Blast cellular component
bounding membrane of organelle Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
spindle pole Hs cellular component 58.9 1.12e-09
extracellular matrix structural constituent Hs molecular function 45.8 2.22e-05
calcium ion binding Hs molecular function 58.9 1.12e-09
protein binding Hs molecular function 45.8 2.22e-05
extracellular region Hs cellular component 58.9 1.12e-09
proteinaceous extracellular matrix Hs cellular component 45.8 2.22e-05
Golgi lumen Hs cellular component 58.9 1.12e-09
plasma membrane Hs cellular component 58.9 1.12e-09
cilium Hs cellular component 58.9 1.12e-09
membrane Hs cellular component 58.9 1.12e-09
integral component of membrane Hs cellular component 58.9 1.12e-09
basolateral plasma membrane Hs cellular component 58.9 1.12e-09
apical plasma membrane Hs cellular component 58.9 1.12e-09
IgG binding Hs molecular function 58.9 1.12e-09
extrinsic component of membrane Hs cellular component 58.9 1.12e-09
anchored component of membrane Hs cellular component 58.9 1.12e-09
cell projection Hs cellular component 58.9 1.12e-09
ciliary membrane Hs cellular component 58.9 1.12e-09
extracellular exosome Hs cellular component 58.9 1.12e-09

GO (InterProScan)

No result

GO Term Analysis Type e-value