Gene Card
Best human hits
HMCN1; SPON1; SPON2
Species
Unique Gene ID
Phmamm.g00001068
Gene Model ID
Phmamm.CG.MTP2014.S26.g01068
Location
S26:259956..276424
Transcript Models and Sequences
Phmamm.CG.MTP2014.S26.g01068.01.t
Phmamm.CG.MTP2014.S26.g01068.02.t
Genoscope Yasuo Villefranche
3 results
AHC0AAA2YI02
Plate: Plate_2_I02
AHC0AAA33YL14
Plate: Plate_33_L14
AHC0AAA203YH11
Plate: Plate_203_H11
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
11 results
| IPR Term | Analysis | Definition |
|---|---|---|
| TSP1_rpt_sf | SUPERFAMILY | Thrombospondin type-1 (TSP1) repeat superfamily |
| Reeler_dom | Pfam | Reeler domain |
| Spondin_N | Pfam | Spondin, N-terminal |
| TSP1_rpt | ProSiteProfiles | Thrombospondin type-1 (TSP1) repeat |
| Spondin_N | ProSiteProfiles | Spondin, N-terminal |
| TSP1_rpt | SMART | Thrombospondin type-1 (TSP1) repeat |
| Reeler_dom | CDD | Reeler domain |
| Spondin_N_sf | Gene3D | Spondin, N-terminal domain superfamily |
| TSP1_rpt_sf | Gene3D | Thrombospondin type-1 (TSP1) repeat superfamily |
| TSP1_rpt | Pfam | Thrombospondin type-1 (TSP1) repeat |
| Reeler_dom | ProSiteProfiles | Reeler domain |
GOSlim
17 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| calcium ion binding | Blast | molecular function |
| protein binding | Orthology | molecular function |
| extracellular region | Orthology | cellular component |
| extracellular space | Orthology | cellular component |
| cytoplasm | Blast | cellular component |
| endoplasmic reticulum lumen | Orthology | cellular component |
| cell adhesion | Orthology | biological process |
| cell junction | Blast | cellular component |
| metal ion binding | Orthology | molecular function |
| extracellular exosome | Blast | cellular component |
| extracellular region part | Orthology | cellular component |
| cellular protein modification process | Orthology | biological process |
| carbohydrate derivative binding | Blast | molecular function |
| binding | Blast | molecular function |
| cell periphery | Blast | cellular component |
| cytoplasmic part | Blast | cellular component |
| plasma membrane region | Blast | cellular component |
GO (Orthology)
9 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| protein binding | Hs | molecular function |
| extracellular region | Hs | cellular component |
| proteinaceous extracellular matrix | Hs | cellular component |
| extracellular space | Hs | cellular component |
| endoplasmic reticulum lumen | Hs | cellular component |
| cell adhesion | Hs | biological process |
| extracellular matrix | Hs | cellular component |
| protein O-linked fucosylation | Hs | biological process |
| metal ion binding | Hs | molecular function |
GO (Blast)
16 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| lipopolysaccharide binding | Hs | molecular function | 138 | 9.41e-36 |
| antigen binding | Hs | molecular function | 138 | 9.41e-36 |
| calcium ion binding | Hs | molecular function | 94.4 | 2.56e-19 |
| protein binding | Hs | molecular function | 516 | 4.86e-170 |
| extracellular region | Hs | cellular component | 516 | 4.86e-170 |
| proteinaceous extracellular matrix | Hs | cellular component | 516 | 4.86e-170 |
| basement membrane | Hs | cellular component | 94.4 | 2.56e-19 |
| extracellular space | Hs | cellular component | 516 | 4.86e-170 |
| cytoplasm | Hs | cellular component | 94.4 | 2.56e-19 |
| endoplasmic reticulum lumen | Hs | cellular component | 516 | 4.86e-170 |
| cell cortex | Hs | cellular component | 94.4 | 2.56e-19 |
| cell junction | Hs | cellular component | 94.4 | 2.56e-19 |
| extracellular matrix | Hs | cellular component | 516 | 4.86e-170 |
| cleavage furrow | Hs | cellular component | 94.4 | 2.56e-19 |
| metal ion binding | Hs | molecular function | 516 | 4.86e-170 |
| extracellular exosome | Hs | cellular component | 138 | 9.41e-36 |
| GO Term | Analysis | Type | e-value |
|---|
