Aniseed - Gene card

Gene Card

Best human hits

CARF

Species

P.mammillata

Unique Gene ID

Phmamm.g00006352

Gene Model ID

Phmamm.CG.MTP2014.S265.g06352

Location

S265:37150..39968

Transcript Models and Sequences

Phmamm.CG.MTP2014.S265.g06352.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

26 results

AHC0AAA261YC24

Plate: Plate_261_C24

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term	Analysis	Definition
CaRF	Pfam	Calcium-responsive transcription factor

GOSlim

6 results

GO Term	Annotation Origin	Type
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Blast	molecular function
DNA binding	Blast	molecular function
transcription factor activity, sequence-specific DNA binding	Blast	molecular function
nucleus	Blast	cellular component
nucleoplasm	Blast	cellular component
nucleolus	Blast	cellular component

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

7 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	59.3	7.58e-10
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	59.3	7.58e-10
DNA binding	Hs	molecular function	59.3	7.58e-10
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	59.3	7.58e-10
nucleus	Hs	cellular component	59.3	7.58e-10
nucleoplasm	Hs	cellular component	59.3	7.58e-10
nucleolus	Hs	cellular component	59.3	7.58e-10

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value