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  1. Gene 'Phmamm.CG.MTP2014.S2...'

Gene Card

Best human hits

ACTA2; ACTB; ACTG1

Species

P.mammillata

Unique Gene ID

Phmamm.g00006421

Gene Model ID

Phmamm.CG.MTP2014.S269.g06421

Location

S269:8083..10860

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S269.g06421.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Actin_CS ProSitePatterns Actin, conserved site
Actin PANTHER Actin family
Actin PRINTS Actin family
Actin SMART Actin family
Actin Pfam Actin family
Actin/actin-like_CS ProSitePatterns Actin/actin-like conserved site

GOSlim

40 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding Blast molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
extracellular space Blast cellular component
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
cytosol Blast cellular component
cytoskeleton Blast cellular component
plasma membrane Blast cellular component
focal adhesion Blast cellular component
membrane Blast cellular component
protein kinase binding Blast molecular function
lamellipodium Blast cellular component
ubiquitin protein ligase binding Blast molecular function
vesicle Blast cellular component
macromolecular complex Blast cellular component
identical protein binding Blast molecular function
myelin sheath Blast cellular component
cell body Blast cellular component
extracellular exosome Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
nuclear lumen Blast cellular component
RNA polymerase II regulatory region sequence-specific DNA binding Blast molecular function
organelle organization Blast biological process
structural molecule activity Blast molecular function
cytoskeletal part Blast cellular component
cytoskeletal protein binding Blast molecular function
cytoplasmic part Blast cellular component
plasma membrane region Blast cellular component
cell projection Blast cellular component
organelle part Blast cellular component
transcription factor binding Blast molecular function
chromatin binding Blast molecular function
macromolecular complex binding Blast molecular function
DNA binding Blast molecular function
nucleoplasm part Blast cellular component
cytoplasmic vesicle Blast cellular component
enzyme binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

43 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 664 0.0
nuclear chromatin Hs cellular component 664 0.0
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 664 0.0
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function 664 0.0
structural constituent of cytoskeleton Hs molecular function 664 0.0
protein binding Hs molecular function 664 0.0
profilin binding Hs molecular function 660 0.0
ATP binding Hs molecular function 664 0.0
extracellular space Hs cellular component 664 0.0
nucleus Hs cellular component 664 0.0
nucleoplasm Hs cellular component 664 0.0
cytoplasm Hs cellular component 664 0.0
cytosol Hs cellular component 664 0.0
cytoskeleton Hs cellular component 664 0.0
actin filament Hs cellular component 660 0.0
plasma membrane Hs cellular component 664 0.0
focal adhesion Hs cellular component 664 0.0
actin cytoskeleton Hs cellular component 664 0.0
membrane Hs cellular component 664 0.0
kinesin binding Hs molecular function 664 0.0
protein kinase binding Hs molecular function 664 0.0
myofibril Hs cellular component 660 0.0
lamellipodium Hs cellular component 654 0.0
filopodium Hs cellular component 654 0.0
smooth muscle contractile fiber Hs cellular component 654 0.0
intracellular ribonucleoprotein complex Hs cellular component 664 0.0
Tat protein binding Hs molecular function 664 0.0
nucleosomal DNA binding Hs molecular function 664 0.0
ubiquitin protein ligase binding Hs molecular function 660 0.0
filamentous actin Hs cellular component 660 0.0
vesicle Hs cellular component 664 0.0
macromolecular complex Hs cellular component 664 0.0
NuA4 histone acetyltransferase complex Hs cellular component 664 0.0
cytoplasmic ribonucleoprotein granule Hs cellular component 664 0.0
identical protein binding Hs molecular function 664 0.0
myelin sheath Hs cellular component 660 0.0
cell body Hs cellular component 654 0.0
phagocytic vesicle Hs cellular component 660 0.0
nitric-oxide synthase binding Hs molecular function 664 0.0
extracellular exosome Hs cellular component 664 0.0
blood microparticle Hs cellular component 664 0.0
dense body Hs cellular component 664 0.0
structural constituent of postsynaptic actin cytoskeleton Hs molecular function 664 0.0

GO (InterProScan)

No result

GO Term Analysis Type e-value





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