- Gene 'Phmamm.CG.MTP2014.S2...'
Gene Card
Best human hits
NOP2; NSUN2; NSUN6
Species
Unique Gene ID
Phmamm.g00001144
Gene Model ID
Phmamm.CG.MTP2014.S28.g01144
Location
S28:158097..167734
Transcript Models and Sequences
Genoscope Yasuo Villefranche
10 results
AHC0AAA73YA01
Plate: Plate_73_A01
AHC0AAA113YH17
Plate: Plate_113_H17
AHC0AAA121YN23
Plate: Plate_121_N23
AHC0AAA148YC24
Plate: Plate_148_C24
AHC0AAA83YF04
Plate: Plate_83_F04
AHC0AAA89YK01
Plate: Plate_89_K01
AHC0AAA171YK17
Plate: Plate_171_K17
AHC0AAA189YE06
Plate: Plate_189_E06
AHC0AAA223YK15
Plate: Plate_223_K15
AHC0AAA242YG15
Plate: Plate_242_G15
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
5 results
| IPR Term | Analysis | Definition |
|---|---|---|
| SAM-dependent_MTases | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferase |
| RCMT | PRINTS | RNA (C5-cytosine) methyltransferase |
| MeTrfase_RsmB/NOP2 | ProSiteProfiles | SAM-dependent methyltransferase RsmB/NOP2-type |
| MeTrfase_RsmB/NOP2 | Pfam | SAM-dependent methyltransferase RsmB/NOP2-type |
| RCMT_NCL1 | PRINTS | tRNA (C5-cytosine) methyltransferase, NCL1 |
GOSlim
20 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| RNA binding | Orthology | molecular function |
| protein binding | Blast | molecular function |
| nucleus | Orthology | cellular component |
| nucleoplasm | Orthology | cellular component |
| nucleolus | Orthology | cellular component |
| cytoplasm | Orthology | cellular component |
| cytosol | Blast | cellular component |
| cytoskeleton | Orthology | cellular component |
| cell cycle | Orthology | biological process |
| transferase activity | Orthology | molecular function |
| cell division | Orthology | biological process |
| cytoskeletal part | Orthology | cellular component |
| microtubule cytoskeleton | Orthology | cellular component |
| RNA processing | Orthology | biological process |
| spermatogenesis | Orthology | biological process |
| cell development | Orthology | biological process |
| metabolic process | Orthology | biological process |
| cytoplasmic part | Orthology | cellular component |
| intracellular non-membrane-bounded organelle | Orthology | cellular component |
| macromolecular complex | Orthology | cellular component |
GO (Orthology)
19 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| tRNA binding | Hs | molecular function |
| RNA binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| nucleoplasm | Hs | cellular component |
| nucleolus | Hs | cellular component |
| cytoplasm | Hs | cellular component |
| spindle | Hs | cellular component |
| cytoskeleton | Hs | cellular component |
| tRNA modification | Hs | biological process |
| cell cycle | Hs | biological process |
| spermatid development | Hs | biological process |
| tRNA processing | Hs | biological process |
| methyltransferase activity | Hs | molecular function |
| tRNA (cytosine-5-)-methyltransferase activity | Hs | molecular function |
| transferase activity | Hs | molecular function |
| tRNA methylation | Hs | biological process |
| methylation | Hs | biological process |
| chromatoid body | Hs | cellular component |
| cell division | Hs | biological process |
GO (Blast)
16 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| tRNA binding | Hs | molecular function | 645 | 0.0 |
| RNA binding | Hs | molecular function | 645 | 0.0 |
| protein binding | Hs | molecular function | 108 | 2.35e-24 |
| nucleus | Hs | cellular component | 645 | 0.0 |
| nucleoplasm | Hs | cellular component | 645 | 0.0 |
| nucleolus | Hs | cellular component | 645 | 0.0 |
| cytoplasm | Hs | cellular component | 645 | 0.0 |
| spindle | Hs | cellular component | 645 | 0.0 |
| cytosol | Hs | cellular component | 83.2 | 1.05e-16 |
| cytoskeleton | Hs | cellular component | 645 | 0.0 |
| methyltransferase activity | Hs | molecular function | 645 | 0.0 |
| S-adenosylmethionine-dependent methyltransferase activity | Hs | molecular function | 108 | 2.35e-24 |
| rRNA (cytosine-C5-)-methyltransferase activity | Hs | molecular function | 108 | 2.35e-24 |
| tRNA (cytosine-5-)-methyltransferase activity | Hs | molecular function | 645 | 0.0 |
| transferase activity | Hs | molecular function | 645 | 0.0 |
| chromatoid body | Hs | cellular component | 645 | 0.0 |
GO (InterProScan)
2 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| methyltransferase activity | Pfam | molecular function | 5.8E-39 |
| tRNA (cytosine-5-)-methyltransferase activity | PRINTS | molecular function | 1.4E-11 |
