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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S2...'

Gene Card

Best human hits

RNASEH1

Species

P.mammillata

Unique Gene ID

Phmamm.g00017121

Gene Model ID

Phmamm.CG.MTP2014.S2804.g17121

Location

S2804:2816..4953

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

6 results

AHC0AAA61YA14

Plate: Plate_61_A14

AHC0AAA151YJ21

Plate: Plate_151_J21

AHC0AAA83YM09

Plate: Plate_83_M09

AHC0AAA168YL15

Plate: Plate_168_L15

AHC0AAA208YF14

Plate: Plate_208_F14

AHC0AAA239YM02

Plate: Plate_239_M02

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
Ribosomal_L9/RNase_H1_N SUPERFAMILY Ribosomal protein L9/RNase H1, N-terminal
RNaseH_domain Pfam Ribonuclease H domain
RNaseH_domain ProSiteProfiles Ribonuclease H domain
RNaseH_sf Gene3D Ribonuclease H superfamily
RNase_H1_euk PIRSF Ribonuclease H1, eukaryote
RNase_H1_N_sf Gene3D Ribonuclease H1, N-terminal domain superfamily
RNaseH-like_sf SUPERFAMILY Ribonuclease H-like superfamily
RNase_H1_N Pfam Ribonuclease H1, N-terminal

GOSlim

10 results

GO Term Annotation Origin Type
magnesium ion binding Orthology molecular function
nucleic acid binding Orthology molecular function
RNA binding Orthology molecular function
nucleus Orthology cellular component
cytoplasm Orthology cellular component
RNA catabolic process Orthology biological process
hydrolase activity Orthology molecular function
metal ion binding Orthology molecular function
RNA metabolic process Orthology biological process
DNA metabolic process Orthology biological process

GO (Orthology)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
magnesium ion binding Hs molecular function
nucleic acid binding Hs molecular function
RNA binding Hs molecular function
nuclease activity Hs molecular function
endonuclease activity Hs molecular function
RNA-DNA hybrid ribonuclease activity Hs molecular function
ribonuclease activity Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
RNA catabolic process Hs biological process
hydrolase activity Hs molecular function
DNA replication, removal of RNA primer Hs biological process
metal ion binding Hs molecular function
nucleic acid phosphodiester bond hydrolysis Hs biological process
RNA phosphodiester bond hydrolysis Hs biological process
RNA phosphodiester bond hydrolysis, endonucleolytic Hs biological process

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
magnesium ion binding Hs molecular function 192 2.45e-60
nucleic acid binding Hs molecular function 192 2.45e-60
RNA binding Hs molecular function 192 2.45e-60
nuclease activity Hs molecular function 192 2.45e-60
endonuclease activity Hs molecular function 192 2.45e-60
RNA-DNA hybrid ribonuclease activity Hs molecular function 192 2.45e-60
ribonuclease activity Hs molecular function 192 2.45e-60
nucleus Hs cellular component 192 2.45e-60
cytoplasm Hs cellular component 192 2.45e-60
hydrolase activity Hs molecular function 192 2.45e-60
metal ion binding Hs molecular function 192 2.45e-60

GO (InterProScan)

3 results

GO Term Analysis Type e-value
magnesium ion binding PIRSF molecular function 1.8E-72
nucleic acid binding Gene3D molecular function 6.6E-52
RNA-DNA hybrid ribonuclease activity PIRSF molecular function 1.8E-72