Login
Help

GENE CARD

Submit your Data

  1. Gene 'Phmamm.CG.MTP2014.S6...'

Gene Card

Best human hits

BMP2; BMP4; GDF10

Species

P.mammillata

Unique Gene ID

Phmamm.g00001174

Gene Model ID

Phmamm.CG.MTP2014.S29.g01174

Location

S29:95125..104356

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S29.g01174.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
TGF-b_propeptide Pfam TGF-beta, propeptide
TGF-b_C Pfam Transforming growth factor-beta, C-terminal
Cystine-knot_cytokine Gene3D Cystine-knot cytokine
TGFb_CS ProSitePatterns Transforming growth factor beta, conserved site
TGF-beta-rel PANTHER Transforming growth factor-beta-related
TGF-b_C SMART Transforming growth factor-beta, C-terminal
Cystine-knot_cytokine SUPERFAMILY Cystine-knot cytokine
TGF-b_C ProSiteProfiles Transforming growth factor-beta, C-terminal

GOSlim

23 results

GO Term Annotation Origin Type
receptor binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
endoplasmic reticulum lumen Blast cellular component
cell surface Blast cellular component
intracellular membrane-bounded organelle Blast cellular component
protein heterodimerization activity Blast molecular function
oxidation-reduction process Blast biological process
catalytic activity Blast molecular function
molecular function regulator Blast molecular function
regulation of signal transduction Blast biological process
signaling receptor activity Blast molecular function
anion binding Blast molecular function
carbohydrate derivative binding Blast molecular function
dephosphorylation Blast biological process
hydrolase activity Blast molecular function
enzyme binding Blast molecular function
enzyme activator activity Blast molecular function
extracellular region part Blast cellular component
chemotaxis Blast biological process
integral component of plasma membrane Blast cellular component
macromolecular complex Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
retinol dehydrogenase activity Hs molecular function 126 1.48e-31
receptor binding Hs molecular function 126 1.48e-31
cytokine activity Hs molecular function 135 3.19e-34
transforming growth factor beta receptor binding Hs molecular function 135 3.19e-34
protein binding Hs molecular function 126 1.48e-31
extracellular region Hs cellular component 135 3.19e-34
proteinaceous extracellular matrix Hs cellular component 122 3.44e-30
extracellular space Hs cellular component 135 3.19e-34
endoplasmic reticulum lumen Hs cellular component 122 3.44e-30
growth factor activity Hs molecular function 135 3.19e-34
heparin binding Hs molecular function 122 3.44e-30
cell surface Hs cellular component 126 1.48e-31
phosphatase activator activity Hs molecular function 126 1.48e-31
extracellular matrix Hs cellular component 135 3.19e-34
co-receptor binding Hs molecular function 126 1.48e-31
chemoattractant activity Hs molecular function 122 3.44e-30
intracellular membrane-bounded organelle Hs cellular component 126 1.48e-31
SMAD binding Hs molecular function 126 1.48e-31
protein heterodimerization activity Hs molecular function 126 1.48e-31
BMP receptor binding Hs molecular function 126 1.48e-31
BMP receptor complex Hs cellular component 126 1.48e-31

GO (InterProScan)

1 result

GO Term Analysis Type e-value
growth factor activity SMART molecular function 1.9E-45