Aniseed - Gene card

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Genoscope Yasuo Villefranche

3 results

AHC0AAA212YL17

Plate: Plate_212_L17

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

15 results

IPR Term	Analysis	Definition
Mib_Herc2_sf	SUPERFAMILY	Mib/herc2 domain superfamily
Ankyrin_rpt-contain_dom	ProSiteProfiles	Ankyrin repeat-containing domain
Mib_Herc2	ProSiteProfiles	Mib-herc2
Znf_ZZ	Pfam	Zinc finger, ZZ-type
Ankyrin_rpt	ProSiteProfiles	Ankyrin repeat
Ankyrin_rpt-contain_dom	Pfam	Ankyrin repeat-containing domain
Mib_Herc2	Pfam	Mib-herc2
Ankyrin_rpt-contain_sf	SUPERFAMILY	Ankyrin repeat-containing domain superfamily
Mib_Herc2_sf	Gene3D	Mib/herc2 domain superfamily
Znf_ZZ	ProSiteProfiles	Zinc finger, ZZ-type
Ankyrin_rpt-contain_dom	CDD	Ankyrin repeat-containing domain
Ankyrin_rpt-contain_sf	Gene3D	Ankyrin repeat-containing domain superfamily
Znf_ZZ	SMART	Zinc finger, ZZ-type
Ankyrin_rpt	SMART	Ankyrin repeat
Znf_RING/FYVE/PHD	Gene3D	Zinc finger, RING/FYVE/PHD-type

GOSlim

29 results

GO Term	Annotation Origin	Type
protein polyubiquitination	Orthology	biological process
actin binding	Orthology	molecular function
ubiquitin-protein transferase activity	Orthology	molecular function
signal transducer activity	Orthology	molecular function
protein binding	Orthology	molecular function
cytoplasm	Orthology	cellular component
endosome	Orthology	cellular component
early endosome	Orthology	cellular component
centrosome	Blast	cellular component
microtubule organizing center	Blast	cellular component
cytosol	Orthology	cellular component
cytoskeleton	Blast	cellular component
plasma membrane	Blast	cellular component
Notch signaling pathway	Orthology	biological process
zinc ion binding	Orthology	molecular function
membrane	Blast	cellular component
protein ubiquitination	Orthology	biological process
transferase activity	Orthology	molecular function
cytoplasmic vesicle	Blast	cellular component
identical protein binding	Blast	molecular function
metal ion binding	Orthology	molecular function
intracellular part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
intracellular signal transduction	Orthology	biological process
positive regulation of signal transduction	Orthology	biological process
organelle	Blast	cellular component
postsynapse	Blast	cellular component
neuron part	Blast	cellular component

GO (Orthology)

17 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
ubiquitin ligase complex	Hs	cellular component
protein polyubiquitination	Hs	biological process
actin binding	Hs	molecular function
ubiquitin-protein transferase activity	Hs	molecular function
signal transducer activity	Hs	molecular function
protein binding	Hs	molecular function
cytoplasm	Hs	cellular component
endosome	Hs	cellular component
early endosome	Hs	cellular component
cytosol	Hs	cellular component
Notch signaling pathway	Hs	biological process
zinc ion binding	Hs	molecular function
protein ubiquitination	Hs	biological process
transferase activity	Hs	molecular function
positive regulation of I-kappaB kinase/NF-kappaB signaling	Hs	biological process
metal ion binding	Hs	molecular function
ubiquitin protein ligase activity	Hs	molecular function

GO (Blast)

21 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
ubiquitin ligase complex	Hs	cellular component	318	1.77e-95
actin binding	Hs	molecular function	318	1.77e-95
ubiquitin-protein transferase activity	Hs	molecular function	318	1.77e-95
signal transducer activity	Hs	molecular function	318	1.77e-95
protein binding	Hs	molecular function	318	1.77e-95
cytoplasm	Hs	cellular component	318	1.77e-95
endosome	Hs	cellular component	318	1.77e-95
early endosome	Hs	cellular component	318	1.77e-95
centrosome	Hs	cellular component	241	3.09e-68
microtubule organizing center	Hs	cellular component	241	3.09e-68
cytosol	Hs	cellular component	318	1.77e-95
cytoskeleton	Hs	cellular component	241	3.09e-68
plasma membrane	Hs	cellular component	241	3.09e-68
zinc ion binding	Hs	molecular function	318	1.77e-95
postsynaptic density	Hs	cellular component	241	3.09e-68
membrane	Hs	cellular component	241	3.09e-68
transferase activity	Hs	molecular function	318	1.77e-95
cytoplasmic vesicle	Hs	cellular component	241	3.09e-68
identical protein binding	Hs	molecular function	66.2	5.37e-11
metal ion binding	Hs	molecular function	318	1.77e-95
ubiquitin protein ligase activity	Hs	molecular function	318	1.77e-95

GO (InterProScan)

5 results

GO Term	Analysis	Type	e-value
ubiquitin-protein transferase activity	Gene3D	molecular function	2.1E-22
protein binding	SMART	molecular function	9.2E-6
zinc ion binding	Pfam	molecular function	5.7E-8
protein ubiquitination	ProSiteProfiles	biological process	11.251
metal ion binding	Gene3D	molecular function	2.1E-22

Gene Card

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