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GENE CARD

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Gene Card

Best human hits

ANGPTL1; FGL2; FIBCD1

Species

P.mammillata

Unique Gene ID

Phmamm.g00006860

Gene Model ID

Phmamm.CG.MTP2014.S296.g06860

Location

S296:14232..15436

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S296.g06860.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

2 results

AHC0AAA128YO17

Plate: Plate_128_O17

AHC0AAA167YA07

Plate: Plate_167_A07

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Fibrinogen-like_C SUPERFAMILY Fibrinogen-like, C-terminal
Fibrinogen_a/b/g_C_dom ProSiteProfiles Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
Fibrinogen_a/b/g_C_dom SMART Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
Fibrinogen_a/b/g_C_dom Pfam Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
Fibrinogen_a/b/g_C_1 Gene3D Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1

GOSlim

15 results

GO Term Annotation Origin Type
receptor binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
peptidase activity Blast molecular function
membrane Blast cellular component
integral component of membrane Blast cellular component
metal ion binding Blast molecular function
extracellular exosome Blast cellular component
macromolecular complex Blast cellular component
carbohydrate derivative binding Blast molecular function
intracellular organelle part Blast cellular component
cytoplasmic vesicle Blast cellular component
endomembrane system Blast cellular component
intracellular organelle lumen Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
receptor binding Hs molecular function 99.8 2.94e-25
protein binding Hs molecular function 98.2 9.95e-25
extracellular region Hs cellular component 99.8 2.94e-25
fibrinogen complex Hs cellular component 99.4 3.43e-25
extracellular space Hs cellular component 99.8 2.94e-25
chitin binding Hs molecular function 98.2 9.95e-25
peptidase activity Hs molecular function 99.4 3.43e-25
membrane Hs cellular component 98.2 9.95e-25
integral component of membrane Hs cellular component 98.2 9.95e-25
metal ion binding Hs molecular function 98.2 9.95e-25
extracellular exosome Hs cellular component 99.8 2.94e-25
ficolin-1-rich granule lumen Hs cellular component 99.4 3.43e-25

GO (InterProScan)

No result

GO Term Analysis Type e-value