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GENE CARD

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Gene Card

Best human hits

DDX58; DHX58; IFIH1

Species

P.mammillata

Unique Gene ID

Phmamm.g00017293

Gene Model ID

Phmamm.CG.MTP2014.S2960.g17293

Location

S2960:12200..14880

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S2960.g17293.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
Helicase_ATP-bd SMART Helicase superfamily 1/2, ATP-binding domain
Helicase_ATP-bd ProSiteProfiles Helicase superfamily 1/2, ATP-binding domain
Helicase/UvrB_N Pfam Helicase/UvrB, N-terminal

GOSlim

24 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
nucleic acid binding Blast molecular function
DNA binding Blast molecular function
double-stranded DNA binding Blast molecular function
RNA binding Blast molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
nucleus Blast cellular component
cytoplasm Blast cellular component
cytosol Blast cellular component
cytoskeleton Blast cellular component
plasma membrane Blast cellular component
zinc ion binding Blast molecular function
membrane Blast cellular component
hydrolase activity Blast molecular function
cell junction Blast cellular component
ubiquitin protein ligase binding Blast molecular function
identical protein binding Blast molecular function
cell projection Blast cellular component
metal ion binding Blast molecular function
nucleoside-triphosphatase activity Blast molecular function
cell projection membrane Blast cellular component
cell leading edge Blast cellular component
macromolecular complex binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

27 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 137 1.64e-36
nucleic acid binding Hs molecular function 137 1.64e-36
DNA binding Hs molecular function 99.8 1.60e-23
double-stranded DNA binding Hs molecular function 137 1.64e-36
RNA binding Hs molecular function 137 1.64e-36
double-stranded RNA binding Hs molecular function 137 1.64e-36
single-stranded RNA binding Hs molecular function 137 1.64e-36
helicase activity Hs molecular function 137 1.64e-36
protein binding Hs molecular function 137 1.64e-36
ATP binding Hs molecular function 137 1.64e-36
nucleus Hs cellular component 99.8 1.60e-23
cytoplasm Hs cellular component 137 1.64e-36
cytosol Hs cellular component 137 1.64e-36
cytoskeleton Hs cellular component 137 1.64e-36
plasma membrane Hs cellular component 137 1.64e-36
bicellular tight junction Hs cellular component 137 1.64e-36
zinc ion binding Hs molecular function 137 1.64e-36
actin cytoskeleton Hs cellular component 137 1.64e-36
membrane Hs cellular component 137 1.64e-36
hydrolase activity Hs molecular function 137 1.64e-36
cell junction Hs cellular component 137 1.64e-36
ubiquitin protein ligase binding Hs molecular function 137 1.64e-36
ruffle membrane Hs cellular component 137 1.64e-36
identical protein binding Hs molecular function 137 1.64e-36
cell projection Hs cellular component 137 1.64e-36
ribonucleoprotein complex binding Hs molecular function 99.8 1.60e-23
metal ion binding Hs molecular function 137 1.64e-36

GO (InterProScan)

3 results

GO Term Analysis Type e-value
DNA binding Pfam molecular function 9.3E-18
ATP binding Pfam molecular function 9.3E-18
hydrolase activity Pfam molecular function 9.3E-18

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