Gene Card
Best human hits
SRBD1; SUPT6H; TMPRSS13
Species
Unique Gene ID
Phmamm.g00007151
Gene Model ID
Phmamm.CG.MTP2014.S316.g07151
Location
S316:120461..150736
Transcript Models and Sequences
AHC0AAA15YB02
Plate: Plate_15_B02
AHC0AAA3YN06
Plate: Plate_3_N06
AHC0AAA33YA15
Plate: Plate_33_A15
AHC0AAA36YN11
Plate: Plate_36_N11
AHC0AAA66YM11
Plate: Plate_66_M11
AHC0AAA70YH24
Plate: Plate_70_H24
AHC0AAA73YH16
Plate: Plate_73_H16
AHC0AAA102YD22
Plate: Plate_102_D22
AHC0AAA107YM19
Plate: Plate_107_M19
AHC0AAA111YA18
Plate: Plate_111_A18
AHC0AAA114YC11
Plate: Plate_114_C11
AHC0AAA134YI14
Plate: Plate_134_I14
AHC0AAA146YF15
Plate: Plate_146_F15
AHC0AAA155YG21
Plate: Plate_155_G21
AHC0AAA91YG18
Plate: Plate_91_G18
AHC0AAA99YC20
Plate: Plate_99_C20
AHC0AAA159YJ13
Plate: Plate_159_J13
AHC0AAA185YN20
Plate: Plate_185_N20
AHC0AAA226YM17
Plate: Plate_226_M17
AHC0AAA227YH15
Plate: Plate_227_H15
AHC0AAA233YM22
Plate: Plate_233_M22
AHC0AAA240YB24
Plate: Plate_240_B24
AHC0AAA244YJ01
Plate: Plate_244_J01
AHC0AAA249YK17
Plate: Plate_249_K17
AHC0AAA255YP21
Plate: Plate_255_P21
AHC0AAA267YA01
Plate: Plate_267_A01
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

IPR Term | Analysis | Definition |
---|---|---|
Spt6_acidic_N_dom | Pfam | Spt6 acidic, N-terminal domain |
TF_Spt6 | PIRSF | Transcription elongation factor Spt6 |
Spt6_SH2 | Pfam | Spt6, SH2 domain |
Spt6_YqgF | Pfam | Transcription elongation factor Spt6, YqgF domain |
Tex-like_dom_sf | Gene3D | Tex-like domain superfamily |
Spt6_HTH_DNA-bd_dom | Pfam | Helix-turn-helix DNA-binding domain of Spt6 |
Tex-like_HTH_dom_sf | Gene3D | Tex-like protein, HTH domain superfamily |
Spt6_HHH | Pfam | Transcription elongation factor Spt6, helix-hairpin-helix motif |
S1_dom | SMART | RNA-binding domain, S1 |
S1_domain | Pfam | S1 domain |
RNaseH-like_sf | SUPERFAMILY | Ribonuclease H-like superfamily |
TF_Spt6 | PANTHER | Transcription elongation factor Spt6 |
S1_domain | ProSiteProfiles | S1 domain |
Spt6_SH2_N | CDD | Spt6, SH2 domain, N terminus |
YqgF/RNaseH-like_dom_sf | Gene3D | YqgF/RNase H-like domain superfamily |
SH2_dom_sf | Gene3D | SH2 domain superfamily |
YqgF/RNaseH-like_dom | SMART | YqgF/RNase H-like domain |
RuvA_2-like | SUPERFAMILY | RuvA domain 2-like |
NA-bd_OB-fold | SUPERFAMILY | Nucleic acid-binding, OB-fold |
Spt6_SH2_C | CDD | Spt6, SH2 domain, C terminus |
GO Term | Annotation Origin | Type |
---|---|---|
nucleic acid binding | Orthology | molecular function |
DNA binding | Orthology | molecular function |
transcription factor activity, sequence-specific DNA binding | Orthology | molecular function |
RNA binding | Orthology | molecular function |
serine-type endopeptidase activity | Blast | molecular function |
protein binding | Orthology | molecular function |
nucleus | Orthology | cellular component |
nucleoplasm | Orthology | cellular component |
nucleobase-containing compound metabolic process | Orthology | biological process |
transcription, DNA-templated | Orthology | biological process |
regulation of transcription, DNA-templated | Orthology | biological process |
regulation of transcription from RNA polymerase II promoter | Orthology | biological process |
transcription from RNA polymerase II promoter | Orthology | biological process |
mRNA processing | Orthology | biological process |
peptidase activity | Blast | molecular function |
serine-type peptidase activity | Blast | molecular function |
RNA splicing | Orthology | biological process |
membrane | Blast | cellular component |
integral component of membrane | Blast | cellular component |
hydrolase activity | Blast | molecular function |
organelle organization | Orthology | biological process |
negative regulation of transcription, DNA-templated | Orthology | biological process |
nucleoplasm part | Orthology | cellular component |
macromolecular complex | Orthology | cellular component |
intracellular protein transport | Orthology | biological process |
regulation of gene expression | Orthology | biological process |
chromatin binding | Orthology | molecular function |
macromolecular complex binding | Orthology | molecular function |
positive regulation of transcription from RNA polymerase II promoter | Orthology | biological process |
intracellular organelle part | Orthology | cellular component |
intracellular non-membrane-bounded organelle | Orthology | cellular component |
mRNA metabolic process | Orthology | biological process |
organic substance transport | Orthology | biological process |
cellular protein modification process | Orthology | biological process |
membrane organization | Blast | biological process |
extracellular space | Blast | cellular component |
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
---|---|---|---|---|
transcription factor activity, core RNA polymerase II binding | Hs | molecular function | 1479 | 0.0 |
nucleic acid binding | Hs | molecular function | 1479 | 0.0 |
DNA binding | Hs | molecular function | 1479 | 0.0 |
transcription factor activity, sequence-specific DNA binding | Hs | molecular function | 1479 | 0.0 |
RNA binding | Hs | molecular function | 1479 | 0.0 |
serine-type endopeptidase activity | Hs | molecular function | 55.8 | 2.07e-07 |
scavenger receptor activity | Hs | molecular function | 55.8 | 2.07e-07 |
protein binding | Hs | molecular function | 1479 | 0.0 |
nucleus | Hs | cellular component | 1479 | 0.0 |
nucleoplasm | Hs | cellular component | 1479 | 0.0 |
transcription elongation factor complex | Hs | cellular component | 1479 | 0.0 |
peptidase activity | Hs | molecular function | 55.8 | 2.07e-07 |
serine-type peptidase activity | Hs | molecular function | 55.8 | 2.07e-07 |
membrane | Hs | cellular component | 55.8 | 2.07e-07 |
integral component of membrane | Hs | cellular component | 55.8 | 2.07e-07 |
hydrolase activity | Hs | molecular function | 55.8 | 2.07e-07 |
nucleosome binding | Hs | molecular function | 1479 | 0.0 |
transcriptionally active chromatin | Hs | cellular component | 1479 | 0.0 |
histone binding | Hs | molecular function | 1479 | 0.0 |
blood microparticle | Hs | cellular component | 55.8 | 2.07e-07 |
GO Term | Analysis | Type | e-value |
---|---|---|---|
transcription factor activity, core RNA polymerase II binding | PANTHER | molecular function | 0.0 |
nucleic acid binding | Pfam | molecular function | 3.1E-8 |
DNA binding | Pfam | molecular function | 1.2E-21 |
nucleobase-containing compound metabolic process | Gene3D | biological process | 2.7E-11 |
regulation of transcription from RNA polymerase II promoter | PANTHER | biological process | 0.0 |
regulation of DNA-templated transcription, elongation | PANTHER | biological process | 0.0 |
positive regulation of transcription elongation from RNA polymerase II promoter | PANTHER | biological process | 0.0 |