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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S3...'

Gene Card

Best human hits

EFL1; GFM1; GFM2

Species

P.mammillata

Unique Gene ID

Phmamm.g00001250

Gene Model ID

Phmamm.CG.MTP2014.S32.g01250

Location

S32:114269..124528

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S32.g01250.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

14 results

AHC0AAA12YE05

Plate: Plate_12_E05

AHC0AAA69YO20

Plate: Plate_69_O20

AHC0AAA73YD21

Plate: Plate_73_D21

AHC0AAA74YM12

Plate: Plate_74_M12

AHC0AAA92YJ06

Plate: Plate_92_J06

AHC0AAA180YM22

Plate: Plate_180_M22

AHC0AAA193YG07

Plate: Plate_193_G07

AHC0AAA202YJ05

Plate: Plate_202_J05

AHC0AAA210YM10

Plate: Plate_210_M10

AHC0AAA231YN03

Plate: Plate_231_N03

AHC0AAA262YM08

Plate: Plate_262_M08

AHC0AAA264YN15

Plate: Plate_264_N15

AHC0AAA266YE19

Plate: Plate_266_E19

AHC0AAA92YL08

Plate: Plate_92_L08

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

12 results

IPR Term Analysis Definition
TF_GTP-bd_dom ProSiteProfiles Transcription factor, GTP-binding domain
EFG_III/V SUPERFAMILY EF-G domain III/V-like
Small_GTP-bd_dom TIGRFAM Small GTP-binding protein domain
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
Transl_B-barrel_sf SUPERFAMILY Translation protein, beta-barrel domain superfamily
G_TR_CS ProSitePatterns Tr-type G domain, conserved site
TF_GTP-bd_dom Pfam Transcription factor, GTP-binding domain
EFG_V-like Pfam Elongation factor EFG, domain V-like
EFG_V-like SMART Elongation factor EFG, domain V-like
Transl_elong_EFG/EF2_IV SMART Translation elongation factor EFG/EF2, domain IV
Ribosomal_S5_D2-typ_fold_subgr Gene3D Ribosomal protein S5 domain 2-type fold, subgroup
Ribosomal_S5_D2-typ_fold SUPERFAMILY Ribosomal protein S5 domain 2-type fold

GOSlim

11 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
RNA binding Orthology molecular function
GTPase activity Orthology molecular function
protein binding Orthology molecular function
GTP binding Orthology molecular function
intracellular Blast cellular component
mitochondrion Orthology cellular component
mitochondrial matrix Orthology cellular component
regulation of gene expression Orthology biological process
organelle organization Orthology biological process
macromolecular complex binding Blast molecular function

GO (Orthology)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
translation elongation factor activity Hs molecular function
GTPase activity Hs molecular function
protein binding Hs molecular function
GTP binding Hs molecular function
mitochondrion Hs cellular component
mitochondrial matrix Hs cellular component
translation Hs biological process
translational elongation Hs biological process
mitochondrial translation Hs biological process
ribosome disassembly Hs biological process
mitochondrial translational termination Hs biological process

GO (Blast)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 487 2.49e-163
RNA binding Hs molecular function 286 1.45e-86
translation elongation factor activity Hs molecular function 487 2.49e-163
GTPase activity Hs molecular function 487 2.49e-163
protein binding Hs molecular function 487 2.49e-163
GTP binding Hs molecular function 487 2.49e-163
intracellular Hs cellular component 286 1.45e-86
mitochondrion Hs cellular component 487 2.49e-163
mitochondrial matrix Hs cellular component 487 2.49e-163
ribosome binding Hs molecular function 96.3 1.73e-20

GO (InterProScan)

2 results

GO Term Analysis Type e-value
GTPase activity Pfam molecular function 7.2E-60
GTP binding Pfam molecular function 7.2E-60