Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

CD209; CRISPLD2; VIT

Species

P.mammillata

Unique Gene ID

Phmamm.g00007199

Gene Model ID

Phmamm.CG.MTP2014.S320.g07199

Location

S320:45806..49218

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S320.g07199.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
LCCL_sf Gene3D LCCL domain superfamily
LCCL_sf SUPERFAMILY LCCL domain superfamily
CTDL_fold SUPERFAMILY C-type lectin fold
LCCL ProSiteProfiles LCCL domain
LCCL SMART LCCL domain
C-type_lectin-like SMART C-type lectin-like
C-type_lectin-like Pfam C-type lectin-like
C-type_lectin-like/link_sf Gene3D C-type lectin-like/link domain superfamily
C-type_lectin-like ProSiteProfiles C-type lectin-like
LCCL Pfam LCCL domain

GOSlim

19 results

GO Term Annotation Origin Type
protein binding Blast molecular function
extracellular region Blast cellular component
cytoplasm Blast cellular component
plasma membrane Blast cellular component
cell surface Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
metal ion binding Blast molecular function
extracellular exosome Blast cellular component
binding Blast molecular function
small molecule binding Blast molecular function
carbohydrate derivative binding Blast molecular function
extracellular region part Blast cellular component
anion binding Blast molecular function
plasma membrane part Blast cellular component
cytoplasmic vesicle Blast cellular component
endomembrane system Blast cellular component
intracellular organelle part Blast cellular component
intracellular organelle lumen Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
virus receptor activity Hs molecular function 62.4 8.69e-11
protein binding Hs molecular function 62.4 8.69e-11
mannose binding Hs molecular function 62.4 8.69e-11
glycosaminoglycan binding Hs molecular function 60.1 6.50e-10
extracellular region Hs cellular component 62.4 8.69e-11
proteinaceous extracellular matrix Hs cellular component 60.1 6.50e-10
interstitial matrix Hs cellular component 59.3 1.48e-09
cytoplasm Hs cellular component 62.4 8.69e-11
plasma membrane Hs cellular component 62.4 8.69e-11
heparin binding Hs molecular function 60.1 6.50e-10
external side of plasma membrane Hs cellular component 62.4 8.69e-11
cell surface Hs cellular component 62.4 8.69e-11
membrane Hs cellular component 62.4 8.69e-11
integral component of membrane Hs cellular component 62.4 8.69e-11
transport vesicle Hs cellular component 60.1 6.50e-10
carbohydrate binding Hs molecular function 62.4 8.69e-11
secretory granule lumen Hs cellular component 60.1 6.50e-10
peptide antigen binding Hs molecular function 62.4 8.69e-11
host cell Hs cellular component 62.4 8.69e-11
virion binding Hs molecular function 62.4 8.69e-11
metal ion binding Hs molecular function 62.4 8.69e-11
extracellular exosome Hs cellular component 62.4 8.69e-11
ficolin-1-rich granule lumen Hs cellular component 60.1 6.50e-10

GO (InterProScan)

No result

GO Term Analysis Type e-value